Psychrobacter sp. KH172YL61: PKHYL_06100
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Entry
PKHYL_06100 CDS
T08351
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pky
Psychrobacter sp. KH172YL61
Pathway
pky03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PKHYL_06100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pky03400
]
PKHYL_06100
Enzymes [BR:
pky01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PKHYL_06100
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PKHYL_06100
DNA repair and recombination proteins [BR:
pky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PKHYL_06100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BBI66419
UniProt:
A0A7U6QLS2
LinkDB
All DBs
Position
complement(506478..506981)
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AA seq
167 aa
AA seq
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MGPEPLSEDFTAEYLYNVIQRNNLSDKDHNNTGSNKKPSTKRTQSIARAIKSVIMEQKVV
VGVGNIYATESLYLSGIHPATPANQLSLEQLIILVDNIKDILKKAIKLGGSTLRDFTVAS
GQTGYFQQTLNVYGRQGEHCLKCDTILENVKLNGRASVYCPNCQPLA
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
ttgggccctgagccactctcggaagattttaccgcagaatatctttataacgttattcaa
cgtaataacttatccgataaagatcataacaatacaggctctaacaaaaaaccatcgacc
aaacgaacacagtccatcgcacgagctatcaaatctgtcattatggaacaaaaagtcgtg
gtaggtgtcggtaatatctatgcgacggaaagcctctacctatcaggtattcaccctgct
accccagccaatcaactgtcacttgagcagctgataattttagttgacaatattaaagat
atattaaaaaaggctatcaaacttggcggctcaacgctacgagattttacagtcgcgagt
ggtcaaacgggttattttcagcagactttaaatgtttatggtaggcaaggagagcattgc
ctaaaatgcgataccattctagaaaatgttaagctcaatggtagagccagcgtttattgt
ccaaattgtcagccgttagcttaa
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