Psychrobacter sp. KH172YL61: PKHYL_06720
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Entry
PKHYL_06720 CDS
T08351
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pky
Psychrobacter sp. KH172YL61
Pathway
pky03030
DNA replication
pky03410
Base excision repair
pky03420
Nucleotide excision repair
pky03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKHYL_06720 (polA)
03410 Base excision repair
PKHYL_06720 (polA)
03420 Nucleotide excision repair
PKHYL_06720 (polA)
03440 Homologous recombination
PKHYL_06720 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pky03032
]
PKHYL_06720 (polA)
03400 DNA repair and recombination proteins [BR:
pky03400
]
PKHYL_06720 (polA)
Enzymes [BR:
pky01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PKHYL_06720 (polA)
DNA replication proteins [BR:
pky03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PKHYL_06720 (polA)
DNA repair and recombination proteins [BR:
pky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PKHYL_06720 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PKHYL_06720 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BBI66481
UniProt:
A0A7U6QMC5
LinkDB
All DBs
Position
complement(555534..557966)
Genome browser
AA seq
810 aa
AA seq
DB search
MTFMTDNIADNTADHDHNSHQALDPKTLPNFDDMPNVALMDTSHVDKDQPPFILVDGSYY
LFRTYHALPKTMQNSQGLITNAIRGTLNALLKLMRRYHPTHMAVCFDTKSPTFRHHMSSD
YKAARPPIDIELVEQIPYIHRLVSALGIPLLRIEGAEADDIIGTLAYRAVEQGHHVVIST
GDKDMMQLVNDGVILEDSFTGKITDTQAVIDKFGINPNQMIDFLTLMGDSSDGIKGVPGI
GKKTAKDLLVEYGDIDNMLKHIGFIKGRGAKGLIEHADDIPFNRKLATIITNLEIGQDWN
DLKINTDPCAHIDELRELYTELEFRNELASLDHPNHPANGSQSVADSQANAESQAQVAKS
LQSANIDNMTGSNHQDKAWHTVLDEPAFDSLVKLLEAAPHFVIDTETTSVHWREAQIVGL
SFAVQAHEAYYIPLTHRLEGDELTAKQLDRDTVLARLKPILENPNIGKIGQHLKYDAHIL
AHYDIDLVGAIHEQPNNWAMDTMLASYVINAAATRHGMDDLARHYLQTQTISFEEVAGKG
AKQVTFDQVAIDIASDYACEDADITYQLFDVFSVELANDANNAKLLHELEIPTAEILCQM
EANGILIKRSFLNELSKRFDEEIVALEKRAYEVAGEEFNLGSPKQLGEMLFDKLGVPGGK
KTKSGQYSTGEAVLSKIDHPLVDITLEYRGLSKLKSTYTDALDNVADSETDRVHTSYHQA
LTSTGRLSSTDPNLQNIPIRTATGRLIRQAFIAPEGRVILAADYSQIELRLMAHFSGDKH
LTHAFNEGLDIHASTAAEVLGKGCCGRYPN
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
gtgacttttatgactgataatatagctgacaataccgccgatcacgaccacaactcccat
caagcactcgatcctaaaaccttaccgaattttgacgacatgcctaacgtcgcgctgatg
gataccagtcatgtagacaaagatcagccgccctttatcttagtcgacggctcgtattat
ctgtttcgcacctatcatgccctcccaaagaccatgcaaaactcgcagggtctaatcacc
aatgcgatacgcggtaccttgaatgcgctgctaaaactcatgcgtcgttatcacccgacc
cacatggctgtctgcttcgataccaaatcaccaacttttcgccatcatatgtcgtctgac
tataaggccgctcgtccgcctatcgatatagaattggtagagcaaatcccttatatccat
cgtttggtcagcgccttgggtattccgctattacgtattgagggtgcagaagccgatgac
atcatcggtacgctcgcctaccgcgctgttgagcagggtcatcatgtggtcatctcaacg
ggcgataaagacatgatgcagttggtcaatgacggcgtgatattagaagatagcttcacc
ggcaaaatcaccgatacccaagctgtcattgataagtttggcattaacccaaaccaaatg
attgatttcttaacgctcatgggcgacagctctgacgggatcaaaggcgtgccaggtatc
ggtaaaaagaccgccaaagacttgttggttgagtatggtgacatcgacaacatgctcaag
catattggctttatcaaaggtcgcggtgctaaaggcttgatcgagcacgccgatgatatt
ccgtttaatagaaagcttgccaccatcattaccaatctagaaatcggccaagactggaac
gatttaaaaatcaataccgacccttgtgcgcatatagatgagctgcgcgaattgtatact
gagcttgagttcagaaacgagctggcatctcttgatcacccaaaccatccggctaacggc
tcgcaaagtgtcgctgatagccaagcaaacgcggagtcacaagcgcaagttgccaaatcg
ctgcaatctgccaatattgataatatgacgggcagtaaccatcaagataaagcgtggcat
actgtactcgatgagccagcgtttgatagcttggtcaaattactagaggcggctccgcac
ttcgtcattgataccgaaaccaccagtgttcattggcgcgaggcgcaaatcgtcgggctg
tcttttgcggtgcaagcgcatgaagcctattatattccgctcactcaccgcttagaaggc
gatgagctaacagcgaaacaactcgaccgcgataccgtactggcgcgcctgaaaccgata
ctagaaaatcctaatatcggtaaaatcggtcagcatctaaagtatgatgcgcatatcctt
gcgcactatgatattgacttagtcggcgccatacatgagcagccaaataactgggcgatg
gacaccatgctggcaagctacgtcatcaatgcggctgccactcgccatggtatggacgat
ttggcacgccattatctgcaaacgcagacgattagctttgaagaagtcgcaggcaaaggc
gcgaagcaagttacatttgaccaagtggctatcgatatcgccagtgactacgcgtgtgaa
gacgctgatattacttatcagttatttgacgtgttcagcgttgagttggctaacgatgcc
aataatgccaaattgctacacgagttagagattccaacagcagagatactttgccagatg
gaagcaaacggcattctcatcaaacgctctttcttaaacgagctatcaaaacgctttgat
gaagagattgtcgccctagaaaaacgggcttatgaagtcgctggtgaagagttcaactta
ggatcaccgaagcagcttggtgagatgctgtttgacaagctgggcgtgccgggcggtaaa
aaaaccaagtctggtcaatactcgactggtgaagccgtcctatcgaaaatagatcatccc
ttagtcgatattaccttagagtatcgcgggctgtctaagctaaaaagcacctataccgat
gcgctagataatgttgcagatagcgagacggatcgcgtgcataccagctatcatcaggca
ttgaccagcacaggtcgtctgtcatcgactgatcctaatttacagaatattccgattcgt
acggcgacgggtcgtctgattcgccaagcctttatcgccccagagggtcgcgtgatccta
gcggccgattattcacaaatcgaacttcgtctcatggcgcatttctcaggcgataagcac
ttgacgcatgcctttaacgaaggcctagatattcatgcttcgactgctgctgaagtgctt
ggcaagggatgttgcggacgttaccccaactga
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