Psychrobacter sp. KH172YL61: PKHYL_12750
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Entry
PKHYL_12750 CDS
T08351
Name
(GenBank) hypothetical protein
KO
K03702
excinuclease ABC subunit B
Organism
pky
Psychrobacter sp. KH172YL61
Pathway
pky03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PKHYL_12750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pky03400
]
PKHYL_12750
DNA repair and recombination proteins [BR:
pky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PKHYL_12750
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PKHYL_12750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
UvrB
UVR
P-loop_SecA
Ish1
LEKR1
PMT2_N
DUF8810
Motif
Other DBs
NCBI-ProteinID:
BBI67084
LinkDB
All DBs
Position
1026849..1027883
Genome browser
AA seq
344 aa
AA seq
DB search
MFDYIPEDALLFIDESHVTVSQIGAMYKGDRSRKENLVNYGFRLPSAMNNRPMKFEEWER
IKPKTIYVSATPALYELEHSEQVVEQVVRPTGLIDPEIEIRPVLTQVDDVLSEITKRREK
DERVLITTLTKRMSEDLTSYLKEYGVKVAYLHSDIDTVERMEIIHELRTGKYDVLVGINL
LREGLDMPEVSLVAIFDADKEGFLRSERSLIQTIGRAARHLNGKAILYADRITPSMQKAI
DETERRRDKQIAFNLEHNITPKGARRSITDKIDTGESLDANDNQAIPVKSNLPDVDINIL
RSPDLLAKEIKRLEKQMQQMSRDLKFEEAAKTRDKVLELKAHLS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgattacattccagaagatgctctgctgttcatcgacgagtcacacgtgaccgtc
tctcagatcggtgcaatgtataaaggggatagatcacgcaaagagaacttggtcaactat
ggctttcgtctgccaagtgcgatgaacaaccgcccgatgaagtttgaagaatgggagcgc
attaagcccaaaaccatttatgtcagtgccacgccagcgctgtatgagcttgaacatagt
gagcaggtggtagagcaggttgtacgtccaacgggtctgattgatcctgagatcgagata
cgtccggtcttgacacaggtcgatgatgtgctgtctgagattaccaaacgccgtgaaaaa
gacgagcgcgtattgattaccaccctgactaagcgcatgtcagaggacttgaccagctat
ctaaaagaatatggtgtcaaggtcgcttatctgcattcagatatcgacacggtagagcgt
atggagatcattcatgagctacgtactggtaagtatgatgtgttggtcggcattaacttg
ctgcgcgaaggtttggatatgcctgaggtctcattggtggcgatattcgacgcagataaa
gaagggtttttgcgttctgagcgttcacttattcagaccattggtcgtgcagcacgtcat
ttgaacggcaaggccattctctatgcagatcgcattactccaagtatgcagaaggcgata
gatgagacagaacgtcgccgcgacaaacagattgcttttaaccttgagcataatattacg
ccaaaaggcgcgcgccgtagcatcactgataagattgatacaggcgaaagcctagatgcc
aatgacaatcaggctatcccagtcaagagcaatttgcctgatgtcgatatcaatatcttg
cgtagtcctgatttattggccaaagaaatcaaacgtcttgagaagcaaatgcagcaaatg
tcgcgtgatttgaaatttgaagaggcggcgaagacccgcgataaagtgctggagcttaaa
gcacatttgagctga
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