Psychrobacter sp. KH172YL61: PKHYL_12800
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Entry
PKHYL_12800 CDS
T08351
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pky
Psychrobacter sp. KH172YL61
Pathway
pky03410
Base excision repair
pky03430
Mismatch repair
pky03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PKHYL_12800
03430 Mismatch repair
PKHYL_12800
03440 Homologous recombination
PKHYL_12800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pky03400
]
PKHYL_12800
DNA repair and recombination proteins [BR:
pky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PKHYL_12800
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PKHYL_12800
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PKHYL_12800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
Motif
Other DBs
NCBI-ProteinID:
BBI67089
UniProt:
A0A7U6KMV5
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All DBs
Position
1030459..1031349
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AA seq
296 aa
AA seq
DB search
MLNLTPRNTSTRIDELPAALQPLAAQSLTLARLYAGRGITAPDELETGLSGLLPADMLHG
ITEAVRLLDIAIDDGQRILIVGDFDCDGATSTALMMRALTKMGAVVDFLVPDRFKYGYGL
TPEIVELGIETFQPDMIVTVDNGISSHEGVARAQADGITVIITDHHLTTKETPPAEAVVN
PNQLDCNFTSKALVGVGVAFYVLGRLAKLRRDAGKSTVQVSQYLDLVALGTIADVGVLDK
NNRILVHHGLSAIRQGRCCMGILALLEQAGRDPKAITRTGFWLCVRATYQCGWTYG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatttaactccccgtaataccagcactcgcattgacgagttgcccgccgcgttg
caaccacttgccgcccaatcattgacgcttgctcgcttatatgcaggccgaggtatcact
gcacctgatgagctggagactggtttgtctggtctgttgcctgctgacatgctgcacggt
atcactgaagccgtgcgtctattggacatcgctatcgatgacggtcagcgtatcctgatc
gttggtgactttgactgtgatggcgcaaccagtaccgcgctgatgatgcgcgcactcaca
aagatgggggcagtcgtcgattttttggtgcccgatcgcttcaaatacggttatgggcta
acgccagagattgtcgaattgggcatcgaaacctttcagccggacatgatcgtgacggtc
gataacggtatctccagtcatgaaggtgtggcgcgtgcccaagcggatggtattacggta
attatcaccgaccatcatctcacgactaaagagacaccacctgctgaagccgtcgtcaat
cccaatcagcttgattgcaatttcaccagtaaagcactggtcggggtaggggtcgcgttt
tatgtgctcggacgattggcaaagctgcgccgcgacgctggcaagtctacggtgcaggtc
agtcagtatttagatttggtagcgcttggtacgatcgcagatgtcggcgtactcgataaa
aacaatcgtatcttggtccatcacgggctatctgctattcgtcaaggtcgctgttgtatg
ggtatattggcgctacttgagcaagcaggccgtgaccccaaagcaattacacgcacagga
ttttggctttgtgttagggccacgtatcaatgcggctggacgtatggataa
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