Psychrobacter sp. KH172YL61: PKHYL_25980
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Entry
PKHYL_25980 CDS
T08351
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pky
Psychrobacter sp. KH172YL61
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pky03016
]
PKHYL_25980 (truA)
Enzymes [BR:
pky01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PKHYL_25980 (truA)
Transfer RNA biogenesis [BR:
pky03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PKHYL_25980 (truA)
Prokaryotic type
PKHYL_25980 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF3860
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
BBI68407
LinkDB
All DBs
Position
1999857..2000693
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AA seq
278 aa
AA seq
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MSKIETIEPERSPTYTLAIAIEFLGTHYHGWQRQREVLGVQEALETAIGKVANESVEVIA
AGRTDASVHASNMIAHFTTHAYRPTHNWLRGVNSLLPDDIALRWIQPMPADFHARFGAIA
RRYRYITLNQAQRPAILNHQVTHIYEPLDLAAMQKAAADIVGTHNFSSYRAAACQSNQPV
RTVSHADLFAHGQFIVFDIQADGFLHHMVRNLMGTLYAIGRHELEPADFLNILSKEDRTI
APPTALRGMACISSMPIILSISSDYCRRHPHTDLVKLT
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagattgaaactatcgaacctgaacgttcaccaacctatactttggcgattgcg
attgagtttttgggtacgcactatcatggttggcagcggcaacgagaagtgctgggtgta
caagaagcactagaaaccgctatcggcaaggtcgccaatgaatccgtcgaagtcatcgcc
gctggacgtactgatgccagtgtccatgccagcaatatgattgctcattttaccacgcat
gcgtatcgccctactcataactggttacgcggtgtcaatagcctactgcctgacgatatt
gctttgcgctggattcaaccgatgccagctgacttccatgcgcgttttggtgcgattgct
cgtcgttatcgttatatcacccttaatcaagcgcagcgccctgcgatactcaatcatcag
gttacccatatctatgagcctttagacctagcagcgatgcaaaaggcagctgccgatatc
gttggtactcacaattttagcagctaccgtgcggcagcctgtcaatccaatcagccagta
cgtaccgtcagtcatgccgaccttttcgctcatggtcagtttatagtgttcgatatacag
gcagatggatttttgcatcacatggttcgtaacttgatgggtacgctatacgcgattggc
agacatgagttagagccagcagactttttaaacattttgagcaaagaggatcgaacaatt
gcgccgcctacggccctcagggggatggcttgtatttcatcaatgcctattatcctgagc
atttccagcgactattgccgcaggcaccctcacaccgatttggttaaacttacctga
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