Psychrobacter sp. KH172YL61: PKHYL_27960
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Entry
PKHYL_27960 CDS
T08351
Symbol
himD
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pky
Psychrobacter sp. KH172YL61
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pky03032
]
PKHYL_27960 (himD)
03036 Chromosome and associated proteins [BR:
pky03036
]
PKHYL_27960 (himD)
03400 DNA repair and recombination proteins [BR:
pky03400
]
PKHYL_27960 (himD)
DNA replication proteins [BR:
pky03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PKHYL_27960 (himD)
Chromosome and associated proteins [BR:
pky03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PKHYL_27960 (himD)
DNA repair and recombination proteins [BR:
pky03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PKHYL_27960 (himD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Pgp3_helical
Motif
Other DBs
NCBI-ProteinID:
BBI68605
UniProt:
A0A7U6KQT5
LinkDB
All DBs
Position
complement(2141290..2141583)
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AA seq
97 aa
AA seq
DB search
MQQAINKSEFISNLSANCDNMADTIVDDAVREILNLMTHTLANDGRVEVRGFGSFCLHHR
RARVGRNPKTGRAYQFLLKRFHTLSQVKHYVKQSMIK
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagcgattaacaaatccgaatttatcagtaatttgagtgcgaattgtgacaac
atggcagataccatcgttgatgatgccgttcgcgaaatattaaatttgatgacccatact
ttagccaatgatggccgagtcgaggttcgtgggtttggcagtttttgtctacatcatcgc
cgcgctcgtgtcggacgcaatcctaaaacggggagagcgtaccagttcctgctaaagcga
ttccacactttaagccaggtaaagcattacgtgaagcagtcaatgataaagtag
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