Psychrobacter sp. KH172YL61: PKHYL_31550
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Entry
PKHYL_31550 CDS
T08351
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pky
Psychrobacter sp. KH172YL61
Pathway
pky03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PKHYL_31550 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pky03019
]
PKHYL_31550 (groL)
03110 Chaperones and folding catalysts [BR:
pky03110
]
PKHYL_31550 (groL)
03029 Mitochondrial biogenesis [BR:
pky03029
]
PKHYL_31550 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pky04147
]
PKHYL_31550 (groL)
Enzymes [BR:
pky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PKHYL_31550 (groL)
Messenger RNA biogenesis [BR:
pky03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PKHYL_31550 (groL)
Chaperones and folding catalysts [BR:
pky03110
]
Heat shock proteins
HSP60 / Chaperonin
PKHYL_31550 (groL)
Mitochondrial biogenesis [BR:
pky03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PKHYL_31550 (groL)
Exosome [BR:
pky04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PKHYL_31550 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PKHYL_31550 (groL)
Exosomal proteins of breast cancer cells
PKHYL_31550 (groL)
Exosomal proteins of colorectal cancer cells
PKHYL_31550 (groL)
Exosomal proteins of bladder cancer cells
PKHYL_31550 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBI68964
LinkDB
All DBs
Position
complement(2429484..2431217)
Genome browser
AA seq
577 aa
AA seq
DB search
MMDGVNVLANAVRVTLGPKGRNVVIDKSFGAPTITKDGVSVAKEIELENKFENMGAQLVR
EVASRTNDVAGDGTTTATVLAQSILQEGMKSVAAGMNPMDLKRGIDKAVRAAVQEIHNLS
TPADDEKAIAQVGSISANSDTKIGELISQAMQKVGKQGVITVEEGSSFEDTLEVVEGMQF
DRGYISPYFANKQDSLTAEFENPYILLVDKKISNIREIVPLLEQVMQQSKPLLIIAEDVE
NEALATLVVNNMRGGLKTCAVKAPGFGDRRKAMLEDIATLTGGTVISEEIGLSLETATLE
QLGTAKKVTVGKENTVIVDGAGNKADIENRVESINRQIAESTSDYDKEKLQERVAKLAGG
VAVIKVGAATETEMKEKKDRVDDALHATRAAVEEGVVPGGGVALVRAMNALSELKGDNDD
QDAGINILRRAMEAPLRQIVTNAGEEASVVVNAVKNGTGNYGYNAASGEYGDMLEMGILD
PAKVSRSALENAASVAGLMLTTEAMITDIPEKEDAMAGMGAAGGMGGMGGMGGMMYFTVA
AKRFVFVRHAQCTISTISLVFLDKPLFAESMNNITYL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgatggacggtgtcaacgttctagcaaacgcagtacgtgtcaccctaggccctaaaggt
cgtaacgtcgttatcgataaatcttttggcgcgccaaccatcaccaaagatggtgtatca
gttgccaaagaaatcgagcttgaaaacaaatttgaaaacatgggtgctcagctcgttcgt
gaagttgctagccgcactaatgatgtcgctggtgatggtacgaccactgcgaccgtattg
gctcagtcaatcttgcaagaaggcatgaaatcagtcgctgctggcatgaacccaatggat
cttaagcgcggtatcgacaaagccgttcgcgcagcagttcaagaaatccataacctatca
acgcccgctgatgatgaaaaagccatcgcgcaagtagggtctatctctgccaactcagat
accaaaatcggtgaattgatctcgcaagcgatgcaaaaagtgggtaaacaaggcgttatc
accgttgaagaagggtcaagctttgaagataccttagaagtggtcgaaggtatgcagttt
gaccgtggttatatcagcccatactttgccaacaagcaagacagcctgactgctgaattt
gaaaacccatatatcctattggttgacaaaaaaatcagcaatatccgtgagatcgtgcca
ttacttgagcaagtcatgcagcaaagcaagccattgctaatcatcgctgaagacgtagaa
aacgaagcattggcaaccttagttgtaaacaacatgcgtggcggcctaaaaacttgtgcc
gttaaagcaccaggttttggcgatcgtcgtaaagccatgctagaagacatcgcaacgcta
acgggcggcacggtaatctctgaagagattggactaagcctagagacggcgacccttgag
caattgggtactgcgaaaaaagtcactgttggtaaagaaaacaccgtgatcgttgatggc
gctggtaacaaagctgacatcgaaaaccgtgttgagtctatcaaccgtcagatcgcagag
tctacttctgattacgataaagaaaagctacaagagcgtgttgcaaaactggcaggcggc
gtagcagtaatcaaagttggcgcagcgactgaaactgaaatgaaagagaagaaagaccgt
gttgacgatgcgctacatgccactcgtgccgcggttgaagaaggcgttgtacctggcggc
ggcgttgcattagttcgtgcgatgaatgcattgtctgagctaaaaggcgacaacgacgac
caagacgctggtatcaacatcctacgccgcgcgatggaagcaccattacgtcaaatcgtt
accaacgctggcgaagaagcatcagtggtggttaacgcagtgaaaaacggcacgggcaac
tacggctacaatgctgcctctggtgagtacggtgatatgcttgagatgggtatccttgat
ccagcaaaagtatcacgttcagcgctagagaatgcagcgtcagtagcaggtctcatgcta
acgactgaagccatgatcactgacataccagaaaaagaagacgcaatggcaggtatgggc
gctgctggtggaatgggcggtatgggtggtatgggcggcatgatgtattttactgtcgct
gcaaagcggtttgtctttgtcagacacgctcaatgtacaataagtactatttcgcttgtc
ttcctcgataaaccgcttttcgctgaaagtatgaataatatcacgtacctgtaa
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