Psychrobacter sp. KH172YL61: PKHYL_32060
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Entry
PKHYL_32060 CDS
T08351
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pky
Psychrobacter sp. KH172YL61
Pathway
pky03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PKHYL_32060 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pky03021
]
PKHYL_32060 (rpoA)
03400 DNA repair and recombination proteins [BR:
pky03400
]
PKHYL_32060 (rpoA)
Enzymes [BR:
pky01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PKHYL_32060 (rpoA)
Transcription machinery [BR:
pky03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PKHYL_32060 (rpoA)
DNA repair and recombination proteins [BR:
pky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PKHYL_32060 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF7219
Motif
Other DBs
NCBI-ProteinID:
BBI69015
LinkDB
All DBs
Position
complement(2467190..2468197)
Genome browser
AA seq
335 aa
AA seq
DB search
MMLNATEFLTPNAINVDTVNETIAKVTLEPLERGFGHTLGNALRRILLSSLPGAAVIEAE
IDGVDHEYSTLEGLQEDVLDLLLNLKGLAITLHDQNEVFLTLDKQGPGTITAADIELPHN
VDIINPELVLGTLSERGHLKMRLRVVMGRGYEPANQRREDGDTKAIGRLKLDASFSPVLR
VAYQVENARVEQRTDLDRLIIELETNGTIDPEEAIRKAATILQQQISIFVDLEAEEAPEP
VKEKEEVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLVQRSETELLKTPNLGKKSLTE
IKDVLASKDLELGMRLDNWPPADLRVDDRFSYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgctaaatgcaactgagtttctaacgccgaatgccattaacgtggatacggttaac
gagacgattgcgaaagtcacgctcgaaccgttagaacgcggctttggtcataccttaggg
aatgccctgcgtcgcatcttgttatcttcattacctggtgctgcagtcatcgaagctgag
attgatggtgttgaccatgaatactcaactttagagggtctgcaagaagatgtccttgac
ctgcttttgaatctaaaaggcttggcaattacacttcatgaccaaaatgaagtattcttg
accttggataaacaaggtccaggcaccattactgctgcagatattgaattgccgcacaac
gtagacattattaacccagagttagtattgggtacgttgagtgagcgcggtcatcttaag
atgcgtctgcgcgtagtgatgggtcgtggatatgagccagcaaatcagcgccgtgaagat
ggtgataccaaagcgattggccgcttaaagcttgatgcaagctttagcccagtactgcgg
gttgcttatcaagtagagaacgctcgtgttgaacagcgtactgaccttgatcgtcttatc
attgagcttgaaactaatggcactatagatccagaagaagcaattcgtaaagcggccact
attttacaacaacagatttcaatctttgttgatttagaagctgaagaagcgcctgagcct
gtgaaagagaaagaagaggtcgatcctgtgctattacgccctgtggacgatcttgaacta
acggttcgctcagccaactgcttaaaagctgaaaacatttactatatcggtgatttggta
cagcgttcagagactgaacttctaaaaaccccaaatcttggtaagaagtcattaaccgaa
atcaaagacgttttggcgtctaaagatttagagcttggtatgcgcctagataactggcca
ccagctgacctgcgggttgatgatcgcttctcttatcgcagccgttaa
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