Psychrobacter sp. KH172YL61: PKHYL_37480
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Entry
PKHYL_37480 CDS
T08351
Symbol
hepA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pky
Psychrobacter sp. KH172YL61
Brite
KEGG Orthology (KO) [BR:
pky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pky03021
]
PKHYL_37480 (hepA)
Transcription machinery [BR:
pky03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PKHYL_37480 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
Tudor_RapA
SNF2-rel_dom
ResIII
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBI69557
LinkDB
All DBs
Position
complement(2895329..2898229)
Genome browser
AA seq
966 aa
AA seq
DB search
MTISIASLHSTEFAVGQRYLSDTESELGLGVVIDVDDRCVHILFPQSEETRVYAKNSAPL
SRVVFKVGDTIYDQDGKSYTVNAVDEVMGVLKYSVDEHEGGTASKGIMETRLAANITLAK
PLERLLAGRIERGDWYELRQDILRMQSALAGHPLKGLMGARVDIIEHQLYIAHEVGKRIA
PRVLLADEVGLGKTIEAGMIIHQQLLTGKAERVLILVPDSLQYQWMIELRRRFNLNFALF
DLVRTAAIKEHDPEQNVFATEQCIIAGMDLLLDHPDLYDQAMEAGFDLLVVDEAHHLHWD
EEQGGNDKYDLIADFAEETPGVMLLTATPEQLGAQSHFARLRLIDPDRFDDLDEFIDGQE
AFAETAAVAGVLIEDKPLSDGQIAALSHLLDISMDELGAINDDERLRTYALNELLDRHGT
GRILFRNTRESVKGFYGRSHQPYPLHLPDAWVDSYQTTGKLREQLWGENQPDGGWLEDDP
RVSWLVDILRGELKQQKVLLIARSGATVESLEAVLRLHAGIKTAIFTEQMTLLERDQAAA
FFADSEGAQILLCSEIGSEGRNFQFASQLILWDLPANPDTLEQRIGRLDRIGQTQQIMLH
VPYVQGTAQERLYHWYNDALNMFNQISPTAQSVQEQYIQELKPVLEGADTADNNAILQDI
IDEALQTRLGLEAQLQAGRDRLLEYNSCRPRVAGRIADAMRDFDGNNLLPHFIERFFASA
NIDHNIQRDGSWVIAPIDSTEISDYIDGLPLGDEDGMTLTFEREQALQREDIDFITHEHP
LMRAIYELASTSTFGNTTVAMLKSAAVPQGMVLLEVNFRIEAIAPKVLNLPATLTTQNIR
VFISEQGSDLSARISADMIMPHVERLDKNRARQVIKVRGDVIEQRYYEAEDIAREQIAEI
GEQASARFSQQWSREIKRLKHLQTINPNVRPEEIERLEQLKAQGEQALGNLSLVPDSIRV
LIAVKP
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgactatctctattgcttcattgcacagtactgaattcgccgttggccaacgttattta
tctgatacggagtctgagcttggcttaggtgtggttatcgatgtcgatgatcgatgtgtg
catattttatttccacaaagtgaagagacgcgcgtctacgcaaaaaactctgcgccacta
tcgcgcgtggtgtttaaggttggcgatacgatctatgaccaagatggcaaaagctataca
gtcaatgctgtcgatgaagtcatgggtgtgctcaaatatagcgtcgatgagcacgagggc
ggcactgcttctaaaggaataatggagacgcgccttgcggccaatatcacgctagccaag
ccgcttgagcgtctgctcgctggtcgtatcgaacgcggcgattggtacgagctgcgccaa
gatatcttgcgtatgcaatcagcattggcaggccatccactcaaagggttgatgggcgcg
cgtgtcgatatcatcgagcatcagctctatatcgcacacgaagtcggtaagcgtatcgcg
ccgcgtgtcctgctcgctgatgaagtaggtcttggtaaaaccatcgaagcgggcatgatt
atccatcagcagctactaacgggtaaagctgagcgtgttttgattttggtgccagacagc
ttacagtatcaatggatgattgagctgcgtcgtcgttttaatctgaattttgcattgttt
gatttggtgcgcacagctgcgatcaaagaacatgatcctgagcaaaacgtctttgccact
gagcagtgcatcatcgcgggcatggatttgttgcttgatcatcctgatttgtacgatcag
gcgatggaagcgggctttgatctattggtcgtcgacgaagcgcaccatttgcactgggat
gaagagcagggcggcaatgacaaatacgatttgattgctgactttgctgaagagacgcct
ggggtgatgctactgacagcaacgccagagcaacttggcgcgcagagtcactttgcccgt
ttgcgcctgatagatcctgatcgctttgatgatttggatgagtttattgatgggcaagaa
gcctttgccgaaaccgctgccgtcgctggcgtcttgatagaagacaagccactgagtgat
gggcaaattgcagctttgagccatttattagacattagtatggatgagctgggcgcaatc
aatgacgatgagcgcttgcgtacttatgcccttaacgagctactggaccgtcatggtacc
ggccgtatcttatttcgcaatactcgtgagagtgtcaaagggttttatggacgaagccat
cagccatatccactgcacctgcctgacgcatgggttgatagctaccaaaccacgggcaaa
ctgcgtgagcagctgtggggcgaaaaccagcccgacggtggttggctagaagatgatcca
cgcgtctcttggttggttgatatcttacgcggtgagcttaagcagcaaaaagtactgcta
atcgctcgcagtggcgcgacagtagagagcttagaagctgtattgcgtctgcatgccggc
atcaaaaccgctatatttactgagcagatgaccctgcttgagcgtgaccaagcagcagca
tttttcgcggatagtgaaggcgcacaaatattattatgctcagagattggctctgaaggt
cgtaacttccagtttgcaagccaactgatactctgggatttaccggcaaacccagatact
ttggagcagcgtatcggtcgtctagatcgtatcggtcagacacagcagatcatgctgcat
gtgccttatgtacagggcacggcgcaagagcgtctgtatcattggtataacgatgcgctg
aatatgtttaaccaaatatcaccaacggcacaaagcgtgcaagagcagtatatccaagag
ctcaagcctgtacttgaaggcgcggatactgcggataacaatgctatcttacaagacatc
attgatgaggcgctacagacgcgtttgggcttagaggcgcagctacaagcgggccgtgat
cgtctgctagagtacaactcgtgtcgtccgcgtgtcgctggacgtattgcggatgccatg
cgtgactttgatggcaataatttgttgccgcatttcattgagcgcttctttgcctctgcc
aatatcgaccataatatccagcgtgatggctcgtgggtcatcgcaccgattgatagcact
gagatcagcgactatatcgatggcttgccgcttggtgatgaagatggtatgacgttgact
tttgagcgtgagcaagcgcttcagcgtgaagatatcgattttattacgcatgagcatcca
ttgatgcgcgctatttatgagcttgccagtaccagcacttttggtaatacgacagtggct
atgctaaaaagcgccgctgtgccgcaagggatggtactgctagaagtaaacttccgtatc
gaagccatcgcaccaaaagtgctcaatctgccagcgacattgaccacgcaaaatatccgt
gtctttatcagtgagcagggtagtgacttgtccgctcgtatcagtgctgatatgatcatg
ccgcatgtggaacgcttggacaaaaaccgtgctcgtcaagtgatcaaagtgcgcggcgat
gtgatcgagcagcggtattacgaggctgaagacatcgcacgtgagcaaatcgcggagatt
ggtgaacaagcaagtgcgcgctttagtcagcagtggtcacgtgagatcaaacgtctcaag
cacttgcagaccattaatccaaatgtacgccccgaagagattgagcgcctagagcagctc
aaggctcaaggagagcaagcgcttggtaatttatcgctagtgccggactctattcgcgta
ctgatagcagtgaagccataa
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