KEGG   Pichia kudriavzevii: C5L36_0A10070
Entry
C5L36_0A10070     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K12589  exosome complex component RRP42
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C5L36_0A10070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkz03019]
    C5L36_0A10070
Messenger RNA biogenesis [BR:pkz03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     C5L36_0A10070
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     C5L36_0A10070
SSDB
Motif
Pfam: RNase_PH RNase_PH_C ATG22 AAA_10
Other DBs
NCBI-GeneID: 40382130
NCBI-ProteinID: XP_029319897
UniProt: A0A1Z8JJG8
LinkDB
Position
1:2213398..2214282
AA seq 294 aa
MVLSVTESSYIYDSLVSSNPTRPDSRKPNQYRPLKANCGFLPNSNGSSRIFNADSTECIT
SVKAKVVRNCKKSDLINVEIDIYGERDSSTLTQHLTTMIKQSLNDSFDYSVLKLTNKYYF
QLYIDVSVLYLPEDFNYSSYTLYSILSLISMGVYLALKSAKLPLLVSEKEDFEVEEEPTF
SDDWEASTYLIPRDPSKSFQPALAFVVGAVGNTVIIDPSLEEEQIIEHGIGITWSNDRIT
TPIQSLTLSSSNTKGLKPALIFKAIEVVRNVAKDVVNALNAISEQQVDVLDTAF
NT seq 885 nt   +upstreamnt  +downstreamnt
atggttttgtcggtgacagaaagctcttacatatatgattcattagtgagttcaaaccca
actagaccggactcaagaaaaccgaaccaatataggcccttaaaggctaattgcggattc
ttacccaattccaatggttcttctcgtatattcaatgcagatagtactgagtgtataaca
agtgtgaaagcaaaggttgtcaggaattgtaaaaaatctgatttgatcaatgttgaaatt
gatatttacggtgaaagagatagcagtacattaactcaacatttgacaaccatgattaaa
caatctctaaatgacagttttgattatagtgtactgaaactaactaataagtactatttc
cagttatacatcgacgtctcggtgctgtatcttccagaagacttcaactattcctcatac
accctttattctattctatccttaatatcaatgggagtatatcttgcattaaagtcggcc
aaactgccattgttggtatccgagaaggaagattttgaagtcgaagaagaacctacgttt
tctgatgattgggaggcttcaacttatttgatcccaagagatccttcgaaatcctttcaa
cctgcgttagcgtttgtggtcggtgcagtaggaaacacagttatcatagatccttctttg
gaggaagagcaaataatagaacacggtattggtattacttggtctaatgataggataaca
acaccaatacaatcactcacgttatcgagttctaacacaaaagggctgaaaccagcattg
atttttaaagcaatagaagtcgttagaaatgttgccaaggatgttgtgaatgctttgaat
gcaatatccgaacaacaggttgatgtattagatactgctttttag

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