KEGG   Pichia kudriavzevii: C5L36_0A10750
Entry
C5L36_0A10750     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03013  Nucleocytoplasmic transport
pkz03015  mRNA surveillance pathway
pkz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    C5L36_0A10750
  09122 Translation
   03013 Nucleocytoplasmic transport
    C5L36_0A10750
   03015 mRNA surveillance pathway
    C5L36_0A10750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkz03019]
    C5L36_0A10750
   03041 Spliceosome [BR:pkz03041]
    C5L36_0A10750
Enzymes [BR:pkz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     C5L36_0A10750
Messenger RNA biogenesis [BR:pkz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     C5L36_0A10750
Spliceosome [BR:pkz03041]
 Complex C
  Other components
   EJC/TREX
    C5L36_0A10750
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    C5L36_0A10750
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-GeneID: 40382200
NCBI-ProteinID: XP_029319967
LinkDB
Position
1:join(2385261..2385468,2385891..2386969)
AA seq 428 aa
MSAEGEEELLDYSDSEEVQQQQTTDATATEDADKKGSYVSIHTSGFKDFLLKEELLRAIG
DCGFEHPSEVQQQCIPQSILGNDVLCQAKSGLGKTAVFVLSSLQQLDATPGEISTVVICH
TRELAYQIKNEYTRFSKYLPDVKTEVFYGGVPIKKDVEILKNKETCPHIVVATPGRLNAL
VRDNLINLKHVKSFIIDECDNVLESIQMRRDVQEIFRATPFQKQVMMFSATLSPEMRQIC
KKFMKNPLEIYVDNEKKLTLHGLQQYFIKLPEEKKNVKLAELLDSLEFNQVIIFVKSTKR
ATALNQLLIDSNFPSIVVHSGIPQEERIQRYKLFKEYNKRICVSTDVFGRGIDIERINLA
INYDMPSEADQYLHRVGRAGRFGTKGLAVSFISNEKDEEILNKIQDRFDVKIQEFPEEGV
DPSTYMNT
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgtctgctgaaggtgaagaagaattacttgactactccgactccgaagaagtccaacaa
caacaaactacagatgcaactgcaaccgaggatgcagacaagaaaggatcttacgtatcc
attcacacctctggtttcaaggacttcttgttgaaggaagagttgcttagagccattggt
gactgtggttttgaacatccttctgaagttcaacaacaatgtattccacagtccattctt
ggtaatgatgtcttgtgtcaagctaagtctggtttgggtaaaactgcagtttttgtcttg
tcttccttacaacagttggacgctactcctggagaaatttccactgttgttatttgtcat
actagagaattagcatatcagatcaaaaatgaatacactagattttccaagtacctgcct
gatgttaagactgaagttttctacggtggtgtgcctattaagaaggatgtggaaatttta
aaaaacaaagaaacttgtcctcatatagttgttgcaactccaggtagactgaatgctttg
gtcagagataatttgatcaatttaaagcatgttaagagttttattatcgatgaatgtgat
aatgttcttgaatccattcaaatgagaagagatgtccaagagattttcagagcaactcct
ttccaaaagcaagttatgatgttttctgcaactttatcaccggaaatgagacaaatatgt
aagaaattcatgaagaatccacttgaaatttatgttgataatgaaaagaagttgacctta
catggtttacaacaatactttatcaaactaccagaggagaagaagaacgtcaagttggct
gagttgttggattccttagaattcaaccaagttatcattttcgtcaaatcaaccaagagg
gccactgctttaaatcaactattaattgattctaatttcccatccattgtggttcattct
ggtatcccacaagaggaaagaatccaaagatataagttattcaaagaatacaacaaaaga
atttgtgtttctacagatgttttcggtagaggtattgatatcgaaagaatcaacttggcc
atcaactacgatatgccaagtgaagcagatcagtacttgcacagagttggtagagcaggt
agattcggtactaaaggtttggctgtttcctttatctctaatgaaaaggatgaagaaatc
ttgaacaagatccaagataggtttgatgttaagattcaagagttccctgaagaaggtgtt
gatccttctacttacatgaacacttaa

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