Pichia kudriavzevii: C5L36_0A10790
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Entry
C5L36_0A10790 CDS
T06133
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pkz
Pichia kudriavzevii
Pathway
pkz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
C5L36_0A10790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkz03041
]
C5L36_0A10790
Enzymes [BR:
pkz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C5L36_0A10790
Spliceosome [BR:
pkz03041
]
Complex C
Other components
Step II factors
C5L36_0A10790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
S1
DEAD
AAA_22
nSTAND3
ABC_tran
AAA_19
AAA_16
nSTAND_NTPase5
NB-ARC
SRP54
ATPase
TsaE
AAA_7
S1_RRP5
AAA_30
Motif
Other DBs
NCBI-GeneID:
40382204
NCBI-ProteinID:
XP_029319971
UniProt:
A0A2U9QZR1
LinkDB
All DBs
Position
1:2394723..2397614
Genome browser
AA seq
963 aa
AA seq
DB search
MSMPALNLQEGQIVKGFVKTIKHFGAFISIPGQSKEGLCHNSDIIESGIKLNRGDEVFVR
VLRISGDGKISLSIKDVDQRKGLLKTVDTDLHTGFKRRNDMDAWERNQINSSYGAKKQRI
IRGNTEDPFAEVESEDDVDTGNEIIEIQLNTEVPQFLHPYKDKLTRSMNKKTSALMDKQS
TRVQGKPTIEKKMDPRSATLDKIAKTGSQIMKECKLQKLEKRLSEEKRRRELSKSQYVDD
PVAKERLEKELKRQETEEIEKSAILEWKRQSKAQSYGIKSKISIQEQRESLPVFQVREDL
LNTVRENNFVVIVGETGSGKTTQITQYLAEGGYANDGIIACTQPRRVAAISVAKRVAEEV
NCKVGEEVGYNVRFEDCTSSKTRIKYMTDGMLQREALVDPLMSRYSVVMLDEAHERTVAT
DILFALLRDAVIKRKGTLKLIVTSATLDSTKFSQYFNDCPVFHIKGRTFPVKIYYTKTPE
LDYIEATIDTVIDVHTNNPPGDILVFLTGREEIETCCETIVQKMSVLYKADPNLSELIVL
PIFSAMPTEMQSRIFEPTPEGKRKVVIATNIAETSITIDGIYYVIDPGFVKVNAYDPRRS
MDSLVVQPISRAQADQRSGRAGRTGPGVCYRLYTKNAYLREMQANTVPEILRQNLSHTIL
MLKAMGINDILNFGFMDRPKEDSILKALEELYILEALDGDGRLTDVGRYMAYFPMEPMLA
KTLIKSFEFGCSYEVIEVISMLSVPDVFYRPREKRELADKMKQRFDDYNGDHLTLLNTYK
KWEANGFSKDWCTENFVHEKSMRKARDVKKQLIKLLENINKKEKGITLELVSCKNKLDQV
RKAFVSGFFKNCAKRSTNHGHNDENGAFRTLIDNISVYVHPSSSLFRVPGVEYVIYHTLV
LTNREYMHCTTKIDPAWLIQYASGVFRKANEGELSISKKREKIQPLYNRFDVNESWRLSK
NRR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgcctgctttaaatttgcaagaaggtcagatagttaaaggctttgtcaagacc
ataaagcattttggtgcctttatttctattccggggcaatcaaaggaaggattatgtcat
aactcagacataatcgaatcgggaattaaactaaacagaggcgatgaagtttttgtgcgt
gtattacgtatatctggagatgggaagatcagtttgtcgatcaaggacgtagatcaaaga
aaaggcttgttaaaaactgttgatacagatttgcatactggttttaaacgtcgaaatgat
atggatgcatgggaaagaaaccaaataaattcatcttacggtgccaaaaagcaacgaata
attagaggaaacacggaagatccttttgccgaggttgaaagtgaagatgatgtggatact
ggaaacgagattatagagattcagttaaacacggaggtcccgcagtttttacatccttac
aaagataagctaaccagaagtatgaacaaaaaaacaagtgctctgatggacaaacaatcg
actagagttcaaggtaaaccaactatcgagaagaaaatggatcctagatctgcaacttta
gataaaattgccaaaacgggtagtcaaataatgaaagagtgtaaattacaaaagcttgaa
aaaagacttagtgaggagaaacgaaggagagagctaagcaaaagtcagtatgttgatgat
cctgttgctaaagaacggttggaaaaagaactcaagcgccaagaaactgaagaaattgaa
aagtctgctattctggaatggaaaagacaatcaaaagcacaatcttatggtatcaaatcc
aaaataagtatacaagaacaaagggaatcattgcctgtatttcaggtcagagaagacctt
ttaaatactgtgagggaaaataactttgtagttattgtcggtgaaacaggttctggtaaa
actacacaaatcacccagtatttggctgaaggcggctatgctaatgatggcatcatagct
tgtacacagcctagaagggttgccgccattagcgttgcaaaaagggttgctgaggaagtc
aactgtaaagtgggtgaagaagttggttataatgtcagattcgaggattgtaccagtagc
aaaaccagaattaagtatatgactgatggtatgctgcaaagagaagccttggtggatcct
ctcatgtctagatattccgtagttatgttggatgaagctcacgaaagaactgttgccact
gacatattgtttgccttgttgagagacgctgttatcaaaagaaagggaactctaaaactt
atagtgacgtcggctaccctagactctacaaaattttcccaatactttaacgactgtcct
gttttccatataaaagggcgtaccttccctgtgaagatatactacaccaagacaccggaa
ttagactacattgaggcaaccatcgatactgtcattgatgttcatacaaataatccacct
ggtgatattcttgttttccttacgggtagagaggaaattgagacttgttgtgaaaccata
gttcagaaaatgagtgtactttataaggcagatcccaatctctctgagcttattgtctta
ccaattttctcagcaatgcctactgagatgcagagtaggatttttgagcccactcctgaa
ggaaaacgtaaggttgtcattgcgacaaacatagcagaaacatctattactatcgatggt
atctactacgtcattgatccaggattcgtcaaggttaatgcttatgatccgaggcgaagt
atggactcactcgttgttcagccgatttcaagagcccaagccgaccaaagatcgggtaga
gctggtagaacgggaccgggtgtgtgctatagattatacaccaaaaatgcgtatttaaga
gagatgcaagcaaatactgttccagaaattctaaggcaaaatctatcacatacaatattg
atgcttaaggcgatgggaataaatgatattctaaattttggttttatggatagaccaaag
gaagattcaattttgaaagctttggaggaattgtatattctagaagcgctagatggtgat
ggaaggctaacggatgttggcaggtacatggcgtatttccctatggagccaatgctagct
aaaactttgatcaagtcatttgaatttggctgcagctatgaagttatcgaggtgatttct
atgttgagtgtcccagatgttttttatagaccacgtgaaaagcgggaacttgctgacaaa
atgaagcagcgttttgatgattataacggggaccacttaactctattaaacacttacaaa
aagtgggaagcaaatgggttttcgaaagattggtgtaccgaaaactttgtccatgagaaa
tcgatgagaaaggcaagggatgtgaagaagcagctgataaaattattagagaatatcaac
aagaaagaaaagggcatcacattagagctagtcagctgcaaaaataaacttgaccaagtc
cgtaaggcctttgtgtcgggatttttcaaaaattgtgccaagagatcgacgaatcatggg
cataacgatgaaaacggagcttttagaacgttgatagacaacatatccgtctatgtacat
cctagttcgtctttattcagagttcccggtgtagaatacgtgatttaccacaccttggtt
ttgactaatagagagtacatgcattgcacgactaagatagatcctgcatggctcatccaa
tatgcgtctggcgttttcaggaaagccaatgaaggtgaactgagtatctccaaaaagaga
gagaaaatccaaccattgtataacagatttgatgtgaatgaaagttggagattaagtaaa
aatcgtagatga
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integrated database retrieval system
