Pichia kudriavzevii: C5L36_0B00220
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Entry
C5L36_0B00220 CDS
T06133
Name
(RefSeq) uncharacterized protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pkz
Pichia kudriavzevii
Pathway
pkz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pkz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
C5L36_0B00220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkz03019
]
C5L36_0B00220
Enzymes [BR:
pkz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
C5L36_0B00220
Messenger RNA biogenesis [BR:
pkz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
C5L36_0B00220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
nSTAND3
AAA_16
ATP_bind_1
SRPRB
SRP54
AAA_14
AAA_24
PduV-EutP
AAA
AAA_28
Motif
Other DBs
NCBI-GeneID:
40382520
NCBI-ProteinID:
XP_029320232
UniProt:
A0A2U9R0F1
LinkDB
All DBs
Position
2:complement(28802..30247)
Genome browser
AA seq
481 aa
AA seq
DB search
MDFGLARIDVEIPAFNEWRVETPKNSTFTLKLESGTAEIFGSELSPDLTYVFKEEMKFAV
ATYHGCKISYTCTVPLDLEYISEETILKQMLNLHLAIENCSVGGKYPRILIIGPKDSGKT
SLARTLAAYALKTSEKQPMLINLDPHLPHFGIASQLSVAKLYDSLDIETSTIAESLTTGP
GTGLYRSQVPHLKCFGLEKFNENLELYKSLISELSVELDAKMKASKDCGTVIIDTPSFNV
SDWKLIQQIVDIFHVDLLLVVGNERLLVDLRKKLTLESNVTMIKTPRSSGCIEKEAKYER
DLQQRSIRQYFYGVERSRLNPFTFHSSVKDFIFLQPNTNEPNAEFLDFMAGDADDIVKTE
AADDDYNPAMQSDSHLAVPIKRNWKYKQMLRYIEEPKEVDLINSVVAIIDDKDFNFNKWS
KLEGDEKLSELNKFVTTQSVLGYSYVSSCDDTTGKIKLLVPSPVSSMPGKILIVTEMRYQ
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggattttgggcttgctagaatagatgttgaaattcctgcttttaacgaatggcgggtt
gaaacgccaaagaattcgacatttactctcaaactagagtcaggaactgcagaaattttt
ggtagtgagttgtcgcccgatctcacctatgtgttcaaggaggaaatgaagtttgcggtt
gcaacataccatgggtgcaagatttcatacacttgtaccgttcctctggatttagaatac
atatcggaagaaacgattttgaaacagatgttgaatctacacttggcaattgaaaactgt
tcagttggtggtaagtatccacgtatcttgattataggtccgaaagactctggaaaaaca
tctcttgcacggactttggctgcatatgccctcaagacttcagaaaaacagccaatgctg
ataaatctcgaccctcatttaccacatttcggtattgcatcacaattatcagtagcaaaa
ctatatgactccttagatattgaaacatctacgattgcagaatcattaaccactgggcca
ggaacaggcctttatagatcgcaggttcctcatttaaaatgttttggccttgaaaaattt
aatgaaaacttggaactttataaatccctaatatctgaactctctgttgaattagacgcc
aaaatgaaggcatcaaaagattgtggtactgttattatagatacgccttctttcaatgtc
tctgattggaaactcattcagcagattgtagatatatttcacgttgatttattgttggtt
gtcggaaacgaacgtctacttgttgatctacgtaagaaattaaccttagaaagtaatgtc
accatgataaaaacaccacgttcaagcggatgtattgagaaggaggccaaatatgaacgt
gatctgcagcagagatcaataagacaatatttctacggtgttgaacgctcacgtttgaac
ccgttcactttccactcgtcggtcaaagactttatttttttgcaaccaaacactaatgag
cctaatgctgaatttttggattttatggcgggagatgccgacgacatagtgaaaacagaa
gctgctgatgacgattataatccggcaatgcaaagcgattcgcatttggctgttccaatc
aagaggaactggaaatataaacaaatgttgagatatattgaggagccaaaggaagtagac
ttaatcaactctgttgtggcgatcatagatgacaaagatttcaattttaataagtggtct
aaattggaaggggatgaaaaacttagtgaattaaacaaatttgtaacaacacagagcgtt
ttgggttactcctacgtttcctcttgcgatgacactacggggaagattaaactgttggtt
ccctcacctgtatcctcaatgccaggcaaaatattaattgtcactgaaatgagataccaa
gagtaa
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