KEGG   Pichia kudriavzevii: C5L36_0B01090
Entry
C5L36_0B01090     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K14962  COMPASS component SWD2
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    C5L36_0B01090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkz03019]
    C5L36_0B01090
   03036 Chromosome and associated proteins [BR:pkz03036]
    C5L36_0B01090
Messenger RNA biogenesis [BR:pkz03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     C5L36_0B01090
Chromosome and associated proteins [BR:pkz03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     C5L36_0B01090
    COMPASS/SET1 complex (yeast)
     C5L36_0B01090
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WDR55 WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 40382607
NCBI-ProteinID: XP_029320319
UniProt: A0A2U9R0L6
LinkDB
Position
2:213277..214311
AA seq 344 aa
MSLSSLPSVSLGESQVKNLTPVKLFPGKDTPFTSLAHNPQGTFFITTSPAGSLQLYDALR
GRHSKTIYSKKYGCSNGTFLLKASQQSTPSSCVIASTIPASNNNKANNALRFLDLNTNSF
IRYFTAHTAQVTSVVSSTSTYYGFDTFYSASRDGTIRVWDSRTETPNSTLAGMGRNPVIS
IDPSGSIMAIWNGSKRVVNLVQVDYFPNGLISSIPVDVNGDVECMKWAGNLLIVDVPGRD
KIVIDTLQHSVVSRLVGVTEFVTDTDDVVRSGSLDITPDSKWCFGGSGDASILAWSLHDL
SPKQRPIIIDSLVDKQAIPRIVVHNPKLACLVTADTEIVLNLYS
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgtcactatcgagtcttccctctgtgtccctaggagagtcacaagtgaaaaatttgact
ccagtgaaactattcccagggaaggatacccctttcacttctcttgcacataacccgcag
gggacgttcttcatcaccacatctcctgccggatccttgcaactatatgatgccctgcga
ggccgacattccaagacaatttactctaaaaaatacggatgttcgaatggcactttttta
ctgaaagcatcgcagcaaagtacaccgagttcgtgtgttattgcatcaactataccagca
tctaataataataaggcaaacaatgcgttacgatttttagacttgaacacaaactcgttc
attcgatactttacagctcatactgctcaagttacttctgttgtttcatccacatccaca
tattatggctttgatacattttattctgcatcgagggatggtactattcgggtgtgggac
tctcgaacagaaacccctaattccacattggcaggaatgggtagaaatccagtaatatct
attgatccctcagggtccattatggccatttggaatggttccaaaagagtcgtcaatctg
gtacaggtggactatttccccaatggtctcatttcgagcatccccgtagacgtgaatggt
gatgtcgaatgcatgaaatgggccggtaatttacttatagtggatgtccccggccgtgac
aaaattgtcattgacacactccagcattcggtggttagtcgattagttggtgttacagag
tttgttacagatactgacgatgtcgtgagaagtggaagccttgacattactcctgattct
aagtggtgttttggtggtagcggtgatgcgtcaatactggcatggtcgttacacgatcta
agccctaaacaacgtccgataatcatagactctttggtggataaacaagccatacccaga
atagttgtccataatcctaaattggcgtgtttagttactgcggacacagaaatagtgctc
aacctttacagttga

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