Pichia kudriavzevii: C5L36_0B02880
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Entry
C5L36_0B02880 CDS
T06133
Name
(RefSeq) uncharacterized protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pkz
Pichia kudriavzevii
Pathway
pkz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
C5L36_0B02880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pkz03041
]
C5L36_0B02880
03009 Ribosome biogenesis [BR:
pkz03009
]
C5L36_0B02880
Enzymes [BR:
pkz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C5L36_0B02880
Spliceosome [BR:
pkz03041
]
Complex A
U2 snRNP components
U2 related factors
C5L36_0B02880
Complex B
C5L36_0B02880
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
C5L36_0B02880
Ribosome biogenesis [BR:
pkz03009
]
Eukaryotic type
90S particles
Helicases
C5L36_0B02880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
AAA_19
Flavi_DEAD
SRP54
AAA_30
T2SSE
nSTAND3
AAA_16
PhoH
Motif
Other DBs
NCBI-GeneID:
40382796
NCBI-ProteinID:
XP_029320508
LinkDB
All DBs
Position
2:566172..568445
Genome browser
AA seq
757 aa
AA seq
DB search
MSDSRPTKKSKISKSSISELEAEHAEAELKAHPHPRENAKLDFHDGGEFNLEKRHKTTTE
YISQLQTGTENPFTGGQFSQKYFDILKVRQELPIHQQRKEFLEMFHSTQIMVLVGETGSG
KTTQVPQFVLYDDMPHLIGKQVACTQPRRVAAMSVAARVADEMDVKLGEEVGYNIRFENM
TSNKTILKYMTDGMLLREAMEDHNLDGYSCIILDEAHERTLATDILMGLLKQLSERRKDL
KIIIMSATLDAEKFQDYFNEAPLLAVPGRTYPVEIYYTRDFQRDYLDAAIRTVLQIHATE
DEGDILVFLTGEEEIEDAVRKLSMEGDQLVRDEGCGPLKVYPLYGSLPPHQQQKIFEPAP
KAFNKNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKA
SAQQRAGRAGRTRPGKCFRLYTEEAFEKELIEQSYPEVLRSNLANTVLELKKLGVDDLVH
FDFMDPPAPETMMRALEELNYLTCIDDEGQLTALGRLASVFPLDPMLAVLLIGSPAFKCS
EEILTIVSMLSVPNVFIRPSGEGAKRAADECKKLFAHQDGDHLTLLNVYHSFESNEAYEI
GQRKWCIQNFLNYRSLKSAQSVRKQLRRMMENYDIELIEGDYEDLSYYDNIRKALANGFF
MQVAKKKSTGKGYITVKDSQDVLLHPSTVLAQQDEWVIYNEFVLTSKNYIRTVTSVRPEW
LVEYAPEYFAVENFQSEDVKMSLSRVHDRVNKMKKLN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatagcagaccaacaaagaaatccaagatatctaaaagttctatttccgaactg
gaagcagaacatgccgaggctgagttgaaggcacatccgcatccaagagagaatgcgaaa
ctggactttcatgatggtggtgaattcaacctggagaaacgtcacaagacaacgacggaa
tatatctcccaattacagacaggtactgagaaccccttcacaggtggtcaattttcccag
aaatattttgatatcttgaaagttagacaggagctaccgattcatcaacagagaaaggag
tttcttgaaatgttccattccacccagatcatggttttggttggtgaaactggttcaggt
aaaaccacccaagttcctcaattcgtactatatgatgatatgccccatttgattggtaaa
caagtcgcatgtacgcaacctcgacgtgttgctgcaatgtctgttgctgcaagagttgca
gatgaaatggatgttaaattaggtgaggaagttggttataatattcgttttgagaacatg
acgtccaataagacaatcttgaaatatatgaccgatggtatgttgctcagagaggcaatg
gaagatcacaacttggatggttactcatgtatcatattagatgaagcccacgagagaacc
ttagcaactgatattttaatggggttattgaaacaacttagtgaacgtaggaaagatttg
aagattatcatcatgtctgcaactttagatgcggaaaaatttcaagattattttaatgaa
gcccccctattggcagtacctggtagaacttatcctgttgaaatctactacactagagat
ttccaaagagattatcttgatgctgccatcagaaccgttctccaaatccatgcaactgaa
gacgaaggtgatattttggtcttcttgacaggtgaggaagaaattgaggatgcagttcgg
aagctatcaatggaaggtgatcaactagttagagatgaaggctgtggacccttgaaagtc
tatccattatatggttccttgccaccacatcagcagcaaaagatctttgaacctgcaccg
aaggcgttcaataaaaatggaagacctggtaggaaggtaattgtttctacaaatattgcc
gaaacttcgttaaccattgacggtattgtttatgttgttgaccctgggttttccaagcag
aaagtttataatccacgtatcagagtcgaatcattacttgtctctccaatctccaaggca
tcagcacaacaaagagctggtagagctggtcgtaccagacctggtaaatgtttcagatta
tatacagaggaggcatttgagaaagagctgattgaacaatcctatccagaagtgttaagg
tcaaacttggcaaatacagtcttggaattgaagaagttgggtgttgatgacttagtgcac
tttgatttcatggaccctcctgcaccagagacaatgatgagagcattagaagaattgaat
tatctgacctgtatcgacgacgagggccagctaacggcactcggaagattagcctctgtt
ttcccattggatccaatgctagcggttctattgattggttctccagcttttaaatgcagt
gaagagatcttgacaattgtttcgatgttatctgtgccaaatgtctttatcagaccttcc
ggagaaggtgccaaaagggctgccgatgaatgtaagaaactgtttgcacaccaagatggc
gaccacttgaccctactgaatgtctaccattccttcgaaagtaacgaagcttacgaaatt
ggtcaaagaaaatggtgtattcaaaacttcctaaactatagatccttgaagtctgcccaa
agtgttcgtaaacaactaaggcgcatgatggaaaattacgatattgaactaatagaaggt
gactacgaagatctttcatactacgataatattcgtaaagcattagccaatggatttttc
atgcaagtggcaaagaagaagagcacaggtaagggatacatcacagtcaaggatagccaa
gacgttttactacacccaagtacagtattggcccaacaagacgaatgggttatatacaat
gagtttgttttaacaagcaagaactatatcagaactgtcacaagtgtcaggcccgaatgg
ctagttgaatatgcgccagagtattttgccgttgagaactttcaaagtgaagatgttaag
atgagtttatccagagtccatgatagagttaacaaaatgaaaaaactaaactag
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