KEGG   Pichia kudriavzevii: C5L36_0B04530
Entry
C5L36_0B04530     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K07573  exosome complex component CSL4
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C5L36_0B04530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkz03019]
    C5L36_0B04530
Messenger RNA biogenesis [BR:pkz03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     C5L36_0B04530
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     C5L36_0B04530
SSDB
Motif
Pfam: EXOSC1 CSL4_N RRP4_S1 Glyco_hydro_1
Other DBs
NCBI-GeneID: 40382967
NCBI-ProteinID: XP_029320679
LinkDB
Position
2:938739..939470
AA seq 243 aa
MQYPEKVLPGQPILPIYEPTATTQSFKYLPGSNVRLETILFNNDRIPTLVSTTAGRVEII
DDKDNENTKIVKVFAYKDPQYKQGELHLDDIKCRSYKAVTPQVNDVVLARVTKITHLRVN
VEILSVLPKGQEENVNNGKLQLLNLLPAESGEYFKALIRSQDVRSTERDSVKTWECYQPG
DIIRAVVLSLGDGASFYLSTARNDLGVVFARNEDGELLYPLDWETMLAPGSGEIEKRKCA
KPF
NT seq 732 nt   +upstreamnt  +downstreamnt
atgcagtacccagaaaaagttttgccaggacaaccaattttgcctatctatgaacctact
gcaacaacacaaagttttaagtacttaccgggatcgaatgttcgattagagacgatttta
ttcaacaacgatcggattccaacgcttgtatcgacaacggctggtcgtgttgaaataatc
gatgataaggataatgaaaacacaaaaattgtaaaggtttttgcatacaaggatccgcaa
tataagcaaggtgaattacatctagatgatattaaatgcagaagctataaggctgtcact
ccacaagtgaatgatgttgttcttgcaagggtaactaagataacacatttgagagtcaat
gtagaaatattaagtgttttacctaaaggtcaggaagaaaatgtgaataatggaaagtta
caattactaaatttactaccagccgagtcaggtgaatacttcaaggcattaatcaggagt
caagatgttagatctacagaacgagatagtgtgaaaacatgggaatgttaccaaccaggt
gatattatacgtgctgttgttctctcgctgggtgacggtgcaagtttttatttatccact
gctagaaatgatttaggtgttgtatttgcacgtaacgaagacggtgaattattgtatcca
ctagattgggaaacaatgcttgcacctggttcaggggaaattgaaaagagaaaatgtgcg
aaaccattttaa

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