KEGG   Pichia kudriavzevii: C5L36_0B11050
Entry
C5L36_0B11050     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K06100  symplekin
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    C5L36_0B11050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pkz03021]
    C5L36_0B11050
   03019 Messenger RNA biogenesis [BR:pkz03019]
    C5L36_0B11050
Transcription machinery [BR:pkz03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     C5L36_0B11050
Messenger RNA biogenesis [BR:pkz03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     C5L36_0B11050
    U7-dependent histone pre-mRNA processing factors
     C5L36_0B11050
SSDB
Motif
Pfam: SYMPK_PTA1_N
Other DBs
NCBI-GeneID: 40383634
NCBI-ProteinID: XP_029321346
UniProt: A0A2U9R461
LinkDB
Position
2:complement(2357765..2359984)
AA seq 739 aa
MDEAHRQIDQIDEAAKLAFANNDYFLQIFDTILAVSLAQPITSNKLQSKCLTFFHRSFYE
KQIPLQQRQENCHKLLPLLNRFIINDENFIHINRLNYSLIQKSIEIFSSVYDLLFQHLIS
NPDVQLWNQITILKDFLIKNWNTSYPLLPTNPKSDINRSLGCKISIVQTFKKIIVTQLPP
PPNIDPENDSDISIAKVPKNHPFLYNSSLNNQSHLLIDSLLNLLGGDSLLSTSFFAAIIT
NLMSIFRKRPNFISNKIMNFILAYESQFKSSSKFEKNNLKIQLIKRFNDRIDKILMSLLL
NKGFIEKDPPLKSRFSNKLSFITEMQNKQKKRGILSIEEESDSEETPNKRRKIDPTFYYD
ESKVVKQENFRSLYKLTTDEDIEDISNISADNLNKLIIESISKVDANRLNYGLEIIISRY
LDLYKRFEFRENKLKESEKAKCDEIAKKELEQKLKAASSSTSSATATNAAAVTAAAAISK
PSNFIDDDYDPSAEKSEGKKHVIDEDDENFDDSDFDLDFDMKNEKYELPEPKSLDPKAKV
KQVELLVDNLIKRSNDGKKWVRYLSRLATRGTNINDEIANYIRDQLFTVFKNNIKSHIDD
LVEWLNEEYYTQFIVHRDSIDHVETSSYLKYTTLVLDYLIPFLEISDRTIFIRLLSELPY
LDYSLISKLKSICLDPLRSKLGFQPILYLIMFRPPVFDTCIKVVEELYKDAINKNNEQLK
NESENILKKYKPDSITNST
NT seq 2220 nt   +upstreamnt  +downstreamnt
atggacgaagcccaccggcaaattgatcagatcgacgaagctgcaaagctcgcctttgct
aataatgactattttctacaaatatttgatacaattttggcagtctcattggctcaacct
ataacttcaaacaaactacaatcgaaatgcttgactttttttcatcgttcattttatgaa
aaacagattcccttacaacagcgtcaagaaaattgccataaactattacccttattaaat
agatttattataaatgatgaaaatttcattcatattaatagactgaattattctttaatt
caaaaatcaattgaaattttctcttctgtttatgacttgctgtttcagcacctaatatca
aacccggatgttcaattgtggaatcaaataacaattttaaaggactttctgattaaaaat
tggaacacctcctaccctttattaccaacaaatcctaaatcagacataaatagatcttta
gggtgtaaaatttcaatcgtccaaacgttcaagaaaattatagtcacccagttgccacca
cctccgaatatagatccagagaatgactcagatatatccattgcaaaagttccaaaaaac
catccattcctttataattcttcactaaacaatcagtcacacctattgattgattcgtta
ttaaacttgttgggtggtgattctcttctatcgacatcgttctttgctgcaataataact
aatttaatgtcaatttttaggaaaaggcctaattttatatcaaataaaataatgaacttt
atcttggcttatgaatcacagtttaaatcatcttcaaaatttgaaaaaaacaacttaaaa
attcaactcatcaaaagatttaatgatagaatagataaaatattaatgtctttgctgctt
aataaaggttttattgagaaagatccacctttgaagtcaagattctcaaataagctgtct
tttattactgagatgcaaaataaacagaagaaaagaggaatattaagtatagaagaggaa
agtgatagcgaggaaaccccaaataagcgtagaaagatagatccgaccttctattatgat
gagtctaaagttgtcaaacaagagaattttagatctttatataagctgacaaccgatgaa
gacattgaagatatttcaaatataagtgctgataatttgaacaaactaataattgagtca
atttctaaagttgatgcaaatagattaaattatggattagaaatcattatttcaagatat
cttgatttatataaaaggttcgaatttagggaaaataagctaaaggaatcggagaaggct
aaatgtgatgaaatagccaaaaaggaattggaacagaaacttaaagcagcatcttctagt
acgtcttctgctactgcgacaaatgcagctgctgtgacagcagctgcagcaatctctaaa
ccgtctaactttatagatgatgattatgatcctagcgctgaaaaatccgaaggtaaaaaa
catgttattgatgaagatgacgaaaacttcgatgattctgactttgatctcgactttgac
atgaaaaacgagaaatatgagctgccagaaccaaaatcacttgatccaaaggcaaaagtg
aagcaggttgaacttttggtagataatttgatcaaaaggtcaaatgacggcaaaaagtgg
gtaagatatctatcaagattggcaactagaggtacaaatattaacgatgaaattgcaaat
tatataagagaccagctttttacagtcttcaagaataacatcaaatctcatattgacgat
ctagttgaatggttaaatgaagaatactatactcagtttattgttcatcgagattcaatc
gatcacgtagaaacttcttcttatctgaagtatacaactcttgtgttagattatttgatt
ccattccttgaaatctctgatcgtacaatttttattagattgctaagtgaactgccatat
cttgattattccttaatcagcaaactgaagtcgatctgtcttgacccacttcgttctaaa
ttaggctttcagcctattctttatttgattatgttcaggcctcctgtttttgatacctgc
atcaaagttgttgaggaattgtacaaggatgccattaataaaaacaacgagcaactaaag
aatgaatctgaaaatatactaaagaaatataaacctgattctatcactaactctacataa

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