KEGG   Pichia kudriavzevii: C5L36_0B11520
Entry
C5L36_0B11520     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K10756  replication factor C subunit 3/5
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03030  DNA replication
pkz03410  Base excision repair
pkz03420  Nucleotide excision repair
pkz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C5L36_0B11520
   03410 Base excision repair
    C5L36_0B11520
   03420 Nucleotide excision repair
    C5L36_0B11520
   03430 Mismatch repair
    C5L36_0B11520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pkz03032]
    C5L36_0B11520
   03036 Chromosome and associated proteins [BR:pkz03036]
    C5L36_0B11520
   03400 DNA repair and recombination proteins [BR:pkz03400]
    C5L36_0B11520
DNA replication proteins [BR:pkz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    C5L36_0B11520
  DNA Replication Termination Factors
   ELG1-RFC complex
    C5L36_0B11520
Chromosome and associated proteins [BR:pkz03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    C5L36_0B11520
DNA repair and recombination proteins [BR:pkz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     C5L36_0B11520
  Check point factors
   HRAD17(Rad24)-RFC complex
    C5L36_0B11520
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 Rad17 AAA_assoc_2 AAA_14 AAA_22 RCF1-5-like_lid AAA_16 ResIII RuvB_N AAA_24 AAA_11 ATPase_2 DEAD Viral_helicase1 AAA_7 DUF815 AAA_30 Mg_chelatase nSTAND3 AAA_18 AAA_5 AAA_3 AAA_19 bpMoxR SRP54 AAA_28 AAA_33 RNA_helicase DO-GTPase1 TIP49 BrkDBD Zeta_toxin
Other DBs
NCBI-GeneID: 40383685
NCBI-ProteinID: XP_029321397
UniProt: A0A099P357
LinkDB
Position
2:2461669..2462649
AA seq 326 aa
MSTENLPWVEKYRPQCLDDVYGQGETVSTIRRFASEGRIPHLLFYGPPGSGKTSTIIALA
KELYGKNYRNMVLELNASDDRGIDVVRDQIKNFASTRQIFTTGFKLIILDEADAMTNVAQ
NALRRVIEKFTKNTRFCILANYSNKLNPALLSRCTKFRFSPLSDDAVLSRIEMVAKLEKL
NLADDAKHSLVRLSRGDMRKALNVMQSCKSSLSNPEDQVDADMIYDCIGAPKPRSIELIF
DAIIKNDWSDAYSTMTKIRNIEGLALIDLISAFVEIIDRYDLKPQTRAQLLTGLSDIEYG
ISRGGNTKIQSTALIGCIKNALEYEA
NT seq 981 nt   +upstreamnt  +downstreamnt
atgtctacagaaaacttaccatgggtggaaaaatatagaccacagtgtctagatgacgtt
tatggtcaaggtgagacagtttccacaatccgtcgttttgcatctgaaggtagaattcct
catcttcttttttatggaccaccaggtagtggtaagacatctacgatcatagcattggca
aaagaactatacggtaaaaactaccggaacatggtcttggaactgaatgccagtgatgat
aggggtattgacgtggttagagatcaaattaaaaattttgcaagcacaaggcagattttt
acaacagggtttaaattgattatattagacgaagccgatgcaatgacaaacgttgcacaa
aatgcgcttcgtagagtgattgaaaagtttacgaaaaacaccagattttgtatattggct
aattactcaaacaagctaaatcctgcattgttatctcgttgtactaagtttagattttct
ccattatcagacgacgcagtattgagtcgaattgaaatggtagctaagttggagaaacta
aatttggcagatgatgccaagcattcacttgttcgtctaagccgtggtgatatgcgtaaa
gctctaaatgttatgcaatcatgtaaatcctcattaagcaacccagaagaccaagttgac
gcagatatgatttatgactgtataggtgcaccaaaaccaagatcaattgaattaatattt
gatgcaataatcaaaaatgattggtctgatgcttattcaaccatgactaaaataagaaac
attgaaggtttggcactgattgatttgatatctgcatttgtcgaaattattgacagatat
gatttgaaacctcaaacaagggcacagttgttaacaggattatccgatatcgaatatggc
atttctagagggggtaataccaaaattcaatctaccgccttgataggttgtataaaaaac
gccctagagtatgaagcttaa

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