KEGG   Pichia kudriavzevii: C5L36_0C11550
Entry
C5L36_0C11550     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K12881  THO complex subunit 4
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03013  Nucleocytoplasmic transport
pkz03015  mRNA surveillance pathway
pkz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    C5L36_0C11550
  09122 Translation
   03013 Nucleocytoplasmic transport
    C5L36_0C11550
   03015 mRNA surveillance pathway
    C5L36_0C11550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkz03019]
    C5L36_0C11550
   03041 Spliceosome [BR:pkz03041]
    C5L36_0C11550
Messenger RNA biogenesis [BR:pkz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     C5L36_0C11550
    TREX complex
     C5L36_0C11550
Spliceosome [BR:pkz03041]
 Complex C
  Other components
   EJC/TREX
    C5L36_0C11550
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    C5L36_0C11550
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_10 RRM_occluded RRM_11 RRM_3 bZIP_1 RRM_PARP14_3
Other DBs
NCBI-GeneID: 40385044
NCBI-ProteinID: XP_029322726
LinkDB
Position
3:join(2503001..2503291,2504062..2504484)
AA seq 237 aa
MSALEQSLDAIIAQNKPAKKQAPPRRNIRAGKSVAKTTGKRGVIARRPVAPAAFKAKKAT
VIQQKLQPKIAAAASLEVATKVVVSGLPKDLNQRSIQEFFTQTVGPTNKVTLSYNEKGKS
TGVATVIFKNATVARKAVAKYNNAPIDNGRSTLKLELVVDTTKVPLAARIQPNVVAPQPS
RPRAPLARQFRNKQVKPVRAIARNRQAAPKKQPKKKKTIEELDQEMADYFSKNENQS
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtctgctttggaacaatccttagacgctatcattgcacaaaataagcctgctaaaaaa
caagcacctccaagacgtaatatcagagcaggtaaaagtgttgccaaaactactggcaag
cgtggcgtcattgcgagaagaccagttgctcctgctgctttcaaggctaagaaggctact
gtcattcaacaaaagttgcaaccaaagattgctgctgctgcttctctggaagttgcaacc
aaggttgttgtctctggtttgccaaaggacttaaaccagagatccattcaagaatttttc
actcaaactgttggtccaaccaataaggtcaccctttcgtacaacgaaaaaggtaaatct
acaggtgtagcaactgttattttcaaaaatgctaccgttgctcgtaaagcggtagctaag
tataacaacgcgccaattgataatggccgttctacattgaagcttgagttagttgttgac
actactaaggttcctcttgctgcaagaattcaaccaaacgttgttgctcctcaaccatcg
agaccaagggcgccacttgcgagacagttcagaaacaagcaggtaaaaccagttagagct
attgcaagaaatagacaagctgcaccaaagaaacaaccaaagaaaaagaaaactattgaa
gaattagaccaagagatggctgattacttttccaagaatgaaaaccaatcttga

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