Pichia kudriavzevii: C5L36_0D02360
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Entry
C5L36_0D02360 CDS
T06133
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pkz
Pichia kudriavzevii
Pathway
pkz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
C5L36_0D02360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkz03019
]
C5L36_0D02360
03041 Spliceosome [BR:
pkz03041
]
C5L36_0D02360
Messenger RNA biogenesis [BR:
pkz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
C5L36_0D02360
Spliceosome [BR:
pkz03041
]
Complex B
Other components
Prp19-related factors
C5L36_0D02360
Complex C
C5L36_0D02360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_8
Motif
Other DBs
NCBI-GeneID:
40385323
NCBI-ProteinID:
XP_029322971
UniProt:
A0A1Z8JPE3
LinkDB
All DBs
Position
4:488855..491401
Genome browser
AA seq
848 aa
AA seq
DB search
MEKNWLVEGINENDLHFELQLLKEPKNEDVWNQYIDHKYQELVEASPGDADHHVLNSLKG
ALLKLYYRKYHIFDTFNSWCDFIELYIKFLNHLKAEELTSELMKIIRVFEVAAVTYAHNV
EFWRKYIEFLFKYDRFIGLDYILRVCETSLREVDKMQHIQIWGLLFKYIKDPGFHIYYNL
FTYISNCYKFDVNIPVIKEGSIPDIDATFKGLIKTLTSIEDLAKFDRVFNRICEPQLLLK
VSDSELELHRKYLDAIINLSLKQQDGNEYNQKIETTYNKIVQKFPDQRGVFTVKYAKYLI
KSNLFEDAMLIAKKTLDSTLTIKDFTLSFNFLTDALEKKVTELSEHEDDPKLKEYLNELE
SLLNNRELLMNDVKLRQNRNSPITWLERLSIFEKIGRQDQLFVCYSKAVLEIDPRKILND
EKLDMPQIWINYSKLYASNGDIETCRKLFETATKYPWTDVSQLEKIWIEWIRFEIDNNNA
EHAKFICSKAISIPEQITSGKVDFEDDDLSVQMKLFKSLKLRSLYIDLVANFETIDDVCK
AYEDCIELQVADERLIVHYCVYLLIHNRFEQGYYVFERNLNGLNGDVQCQLYDVFMERLL
KDWNNLAMGKEKVREIFENGLRTFTDMGNYESLRDTYIRYSEFERKYGSQTRSLRILREG
ILTMDTHGDKFKLYRVLIQNTMKLLGIEATADVIKDALEELSVNLPGYTTELVKELIDIE
VLLGHTERARKVLEYAAQEIMEFGKTKTAKSDIWELFKTFEIKNGSESTYKEMLRRKRYL
ENKYGSSRDAGDELNKPKYSSTNTEVAKQLNDRVGFVPSSSSSKLETEAALPKKTTVQNN
DAIELDMD
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaattggcttgttgaaggaataaacgagaatgatttgcattttgaattacag
ttactgaaagaacctaaaaatgaagatgtttggaaccaatatattgatcataaatatcag
gaactagttgaagcatctccaggagatgcggatcaccatgtcttgaattcacttaagggt
gctttgttgaaactgtactatagaaaataccatatattcgatacattcaattcatggtgt
gattttattgaactttatattaaatttttgaatcacctaaaagctgaggaattaacctct
gagcttatgaagattatacgagttttcgaagtggcagcagtgacatatgcgcataatgta
gagttctggaggaaatatattgaatttctattcaaatatgatcggtttatagggctggac
tatatattaagggtgtgtgaaacgagtctacgagaagttgataaaatgcaacacatacaa
atatggggcctattattcaagtacattaaagatccaggtttccacatttactacaattta
ttcacatacatttcaaattgctataaatttgatgttaacattccagttataaaagaagga
tctatacctgatatagatgctacgtttaaaggacttataaaaactcttacctccattgag
gatttagctaagttcgatagagtgttcaatagaatatgcgagccacagctgcttctcaaa
gtttcagattcagaactcgaactgcataggaaatacctcgatgctattataaacctttca
ttaaagcagcaagatggaaacgaatataatcaaaaaatcgaaactacatacaataaaatc
gtccagaaatttcctgatcaaagaggagtattcacagtcaaatatgcaaaatatttaatc
aagtccaatttatttgaggatgccatgttaatagccaaaaaaacacttgactctacgcta
actataaaagatttcactttatcttttaattttctcacagatgcattggagaaaaaagtc
acggaactttcagagcacgaggacgacccaaaacttaaagaatatcttaacgaacttgaa
agtttattgaataatcgagaacttctgatgaacgatgttaagttgaggcagaatcgaaac
agccccattacttggctggagaggttgtcgatatttgagaagattggtcgacaagaccaa
ctgtttgtatgctattcgaaggctgttttagaaatcgatcccagaaagattctgaatgat
gaaaaattagacatgccacaaatttggattaattattcaaagctgtatgcgtcaaatggg
gatatagaaacatgtcgaaaattatttgaaactgctacaaaatatccttggacggacgtc
tcacaattagaaaaaatatggattgaatggataagatttgaaatcgataataacaatgca
gaacatgcaaagtttatctgtagtaaagccatcagtattccggagcagattaccagtggt
aaagttgattttgaggatgatgacttaagtgtgcagatgaagcttttcaagagcttgaag
ctaagaagtctatacattgatcttgttgccaactttgaaaccattgatgatgtctgtaaa
gcatatgaagattgcattgagttgcaagttgctgatgaaagacttatagtccattattgt
gtttatttgctaatacataatcgctttgagcagggctactatgtttttgaaagaaacctc
aacggcctaaatggggatgtccagtgtcaactttatgatgtgtttatggagagactgctg
aaagactggaataatttggcaatgggtaaagaaaaagtacgtgaaatttttgaaaatggg
ctaagaacatttactgacatgggtaactatgaaagtttgagagacacctatataaggtac
tcggaatttgaacgcaaatacggttcccagacccgtagtttaaggatcttaagggaaggt
attttaactatggacacacatggagataaatttaagctttacagagttctaatccaaaac
accatgaaattgctgggaatagaggcaacggctgatgttatcaaagatgcactagaggag
ttatctgttaaccttccagggtataccacagaactggtgaaagaactgatcgatatcgag
gtacttttgggacatacagaacgtgcaaggaaagttctagagtacgcagcccaggagata
atggagtttggtaaaaccaaaacagctaaatctgatatctgggagctattcaaaactttt
gagatcaaaaacggctccgaaagcacatacaaggagatgttgcggagaaaaagatacctc
gagaataagtacggctctagtcgtgatgctggagacgaacttaataaaccaaaatacagc
tcaacaaatacggaggttgctaaacagttgaatgaccgtgtgggatttgtgccatcatcc
agtagttcgaaattagaaacagaagctgctcttccaaagaaaacaacagtccaaaataac
gatgccattgagcttgacatggattga
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