KEGG   Pichia kudriavzevii: C5L36_0D02360
Entry
C5L36_0D02360     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    C5L36_0D02360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkz03019]
    C5L36_0D02360
   03041 Spliceosome [BR:pkz03041]
    C5L36_0D02360
Messenger RNA biogenesis [BR:pkz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     C5L36_0D02360
Spliceosome [BR:pkz03041]
 Complex B
  Other components
   Prp19-related factors
    C5L36_0D02360
 Complex C
    C5L36_0D02360
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 TPR_8
Other DBs
NCBI-GeneID: 40385323
NCBI-ProteinID: XP_029322971
UniProt: A0A1Z8JPE3
LinkDB
Position
4:488855..491401
AA seq 848 aa
MEKNWLVEGINENDLHFELQLLKEPKNEDVWNQYIDHKYQELVEASPGDADHHVLNSLKG
ALLKLYYRKYHIFDTFNSWCDFIELYIKFLNHLKAEELTSELMKIIRVFEVAAVTYAHNV
EFWRKYIEFLFKYDRFIGLDYILRVCETSLREVDKMQHIQIWGLLFKYIKDPGFHIYYNL
FTYISNCYKFDVNIPVIKEGSIPDIDATFKGLIKTLTSIEDLAKFDRVFNRICEPQLLLK
VSDSELELHRKYLDAIINLSLKQQDGNEYNQKIETTYNKIVQKFPDQRGVFTVKYAKYLI
KSNLFEDAMLIAKKTLDSTLTIKDFTLSFNFLTDALEKKVTELSEHEDDPKLKEYLNELE
SLLNNRELLMNDVKLRQNRNSPITWLERLSIFEKIGRQDQLFVCYSKAVLEIDPRKILND
EKLDMPQIWINYSKLYASNGDIETCRKLFETATKYPWTDVSQLEKIWIEWIRFEIDNNNA
EHAKFICSKAISIPEQITSGKVDFEDDDLSVQMKLFKSLKLRSLYIDLVANFETIDDVCK
AYEDCIELQVADERLIVHYCVYLLIHNRFEQGYYVFERNLNGLNGDVQCQLYDVFMERLL
KDWNNLAMGKEKVREIFENGLRTFTDMGNYESLRDTYIRYSEFERKYGSQTRSLRILREG
ILTMDTHGDKFKLYRVLIQNTMKLLGIEATADVIKDALEELSVNLPGYTTELVKELIDIE
VLLGHTERARKVLEYAAQEIMEFGKTKTAKSDIWELFKTFEIKNGSESTYKEMLRRKRYL
ENKYGSSRDAGDELNKPKYSSTNTEVAKQLNDRVGFVPSSSSSKLETEAALPKKTTVQNN
DAIELDMD
NT seq 2547 nt   +upstreamnt  +downstreamnt
atggagaaaaattggcttgttgaaggaataaacgagaatgatttgcattttgaattacag
ttactgaaagaacctaaaaatgaagatgtttggaaccaatatattgatcataaatatcag
gaactagttgaagcatctccaggagatgcggatcaccatgtcttgaattcacttaagggt
gctttgttgaaactgtactatagaaaataccatatattcgatacattcaattcatggtgt
gattttattgaactttatattaaatttttgaatcacctaaaagctgaggaattaacctct
gagcttatgaagattatacgagttttcgaagtggcagcagtgacatatgcgcataatgta
gagttctggaggaaatatattgaatttctattcaaatatgatcggtttatagggctggac
tatatattaagggtgtgtgaaacgagtctacgagaagttgataaaatgcaacacatacaa
atatggggcctattattcaagtacattaaagatccaggtttccacatttactacaattta
ttcacatacatttcaaattgctataaatttgatgttaacattccagttataaaagaagga
tctatacctgatatagatgctacgtttaaaggacttataaaaactcttacctccattgag
gatttagctaagttcgatagagtgttcaatagaatatgcgagccacagctgcttctcaaa
gtttcagattcagaactcgaactgcataggaaatacctcgatgctattataaacctttca
ttaaagcagcaagatggaaacgaatataatcaaaaaatcgaaactacatacaataaaatc
gtccagaaatttcctgatcaaagaggagtattcacagtcaaatatgcaaaatatttaatc
aagtccaatttatttgaggatgccatgttaatagccaaaaaaacacttgactctacgcta
actataaaagatttcactttatcttttaattttctcacagatgcattggagaaaaaagtc
acggaactttcagagcacgaggacgacccaaaacttaaagaatatcttaacgaacttgaa
agtttattgaataatcgagaacttctgatgaacgatgttaagttgaggcagaatcgaaac
agccccattacttggctggagaggttgtcgatatttgagaagattggtcgacaagaccaa
ctgtttgtatgctattcgaaggctgttttagaaatcgatcccagaaagattctgaatgat
gaaaaattagacatgccacaaatttggattaattattcaaagctgtatgcgtcaaatggg
gatatagaaacatgtcgaaaattatttgaaactgctacaaaatatccttggacggacgtc
tcacaattagaaaaaatatggattgaatggataagatttgaaatcgataataacaatgca
gaacatgcaaagtttatctgtagtaaagccatcagtattccggagcagattaccagtggt
aaagttgattttgaggatgatgacttaagtgtgcagatgaagcttttcaagagcttgaag
ctaagaagtctatacattgatcttgttgccaactttgaaaccattgatgatgtctgtaaa
gcatatgaagattgcattgagttgcaagttgctgatgaaagacttatagtccattattgt
gtttatttgctaatacataatcgctttgagcagggctactatgtttttgaaagaaacctc
aacggcctaaatggggatgtccagtgtcaactttatgatgtgtttatggagagactgctg
aaagactggaataatttggcaatgggtaaagaaaaagtacgtgaaatttttgaaaatggg
ctaagaacatttactgacatgggtaactatgaaagtttgagagacacctatataaggtac
tcggaatttgaacgcaaatacggttcccagacccgtagtttaaggatcttaagggaaggt
attttaactatggacacacatggagataaatttaagctttacagagttctaatccaaaac
accatgaaattgctgggaatagaggcaacggctgatgttatcaaagatgcactagaggag
ttatctgttaaccttccagggtataccacagaactggtgaaagaactgatcgatatcgag
gtacttttgggacatacagaacgtgcaaggaaagttctagagtacgcagcccaggagata
atggagtttggtaaaaccaaaacagctaaatctgatatctgggagctattcaaaactttt
gagatcaaaaacggctccgaaagcacatacaaggagatgttgcggagaaaaagatacctc
gagaataagtacggctctagtcgtgatgctggagacgaacttaataaaccaaaatacagc
tcaacaaatacggaggttgctaaacagttgaatgaccgtgtgggatttgtgccatcatcc
agtagttcgaaattagaaacagaagctgctcttccaaagaaaacaacagtccaaaataac
gatgccattgagcttgacatggattga

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