Pichia kudriavzevii: C5L36_0D04170
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Entry
C5L36_0D04170 CDS
T06133
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pkz
Pichia kudriavzevii
Pathway
pkz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pkz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
C5L36_0D04170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkz03021
]
C5L36_0D04170
03019 Messenger RNA biogenesis [BR:
pkz03019
]
C5L36_0D04170
Transcription machinery [BR:
pkz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
C5L36_0D04170
Messenger RNA biogenesis [BR:
pkz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
C5L36_0D04170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pcf11_C
CID
zf_PCFS4
TFIIA
Pfc11_Clp1_ID
Eisosome1
EIF4E-T
T4_Tape_measure
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-GeneID:
40385517
NCBI-ProteinID:
XP_029323165
UniProt:
A0A2U9R9T6
LinkDB
All DBs
Position
4:860269..862089
Genome browser
AA seq
606 aa
AA seq
DB search
MSMSTHSSAVSGNGASFAEPSKGHGSFGEQYAASLQELTFNSRPIIEAHTLLAEENTAHA
LEIVVAIEERIEKAIPSQKLYSLYLLDSISKNIGLPYTNLFSNNLFKTFTRTYGLVDDPT
RCKLIKLFKTWKVPTAATGLPLFDQGQLDRIEEFLIKVTNPLVNNNRTVADSMKNANLGS
GGTFNGGPATDILNKDKFTLINETDELLRMVDARLKVMSDTKTQQRYTLLNKLKTILGGK
SSIPQAQLDEVAKQLHAIRTDEILKSNSIKREKEAELFKLQQQQQQQQQQQQQQQQQQPQ
NVQPQNVQPQNVQPQNVQPQTVQPQISSLQGLLNLSNQAPVANPLGLKNLSFLENILKKT
SNGGINETNTTNAPQVDFKFIKPSKKVIVEDAVLDQKFINNHVPTITDISLLYEFKPIQC
KECGRRFSDDEAGAVAKRQHDEWHQRVDARMRTGGSGLGGVVNRSWYLRGREWMEFEYNE
DEIDKHGLSVNGDKHGSSNDGSTCLRKDKEGDKDKREATDEGSSKYEHFDPSEAPKHIVR
IPESSSNEVVCAICRDKLVGVFDEESGDWIWRNAIMYRSRVLHWSCYMETRQRGRRSLGR
ERSPQR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgacacatagttcggcggtgtctggtaatggcgcctcctttgcagaacct
tcaaagggccacggctcctttggagagcagtatgcagcctcacttcaggagttgacattc
aactcaaggcctatcattgaggcacataccttgcttgcagaggaaaacacggcgcatgct
ctcgagattgttgtcgccattgaggaacggatagagaaggccattccttcgcagaagcta
tattctttatacttgttagactccatttctaagaacataggcttgccctataccaactta
ttttcaaataacctatttaaaactttcacccgtacgtacgggttggtggatgatcccaca
agatgtaaactgatcaagttgttcaagacatggaaggtccccacggcggcaaccgggttg
ccactatttgatcagggccaacttgatcggatcgaagagtttctaattaaggtcaccaat
cctctggtcaacaataatagaacagtggcagatagtatgaagaatgccaatttaggtagt
ggcggcacctttaatggtggccctgcaacagacattcttaacaaggacaagtttaccctt
ataaatgaaacggacgagctattaagaatggtggatgctaggttgaaggtgatgtccgat
accaagacccaacaacggtatactctattgaacaagttaaagacaattctcggcggaaag
agctctattccccaagcacagttggatgaggtggccaaacaattgcatgccattcgaacc
gacgagattctcaagagtaactcgatcaagagggaaaaggaggcagagttgttcaaattg
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcaacaacctcaa
aacgtacaacctcaaaacgtacaacctcaaaacgtacaacctcaaaacgtacaacctcaa
actgtacaacctcaaatttcttcattacaaggattgctcaatttgagcaaccaagcgccg
gttgcaaatcctcttggtctaaagaacctctcgtttcttgaaaatatactgaagaaaacc
agtaatggcgggatcaatgaaacaaatactacaaatgccccccaagttgactttaaattt
atcaagccttccaagaaggttattgtagaagacgcagttttagatcaaaagttcataaat
aaccatgtgccgacaataactgatatatctctcttgtatgagttcaagccaatacaatgt
aaagagtgtggtagacgattcagtgatgatgaggcgggcgctgtagccaaacggcagcat
gacgaatggcaccaaagggtcgatgccagaatgagaaccggaggttctggactaggtggt
gttgtgaatcgttcttggtatcttagggggagagaatggatggaatttgaatataatgaa
gatgaaatagacaagcacgggctctctgttaacggtgataaacatggtagttccaacgat
ggcagcacatgtttaagaaaagataaagagggggacaaggacaagagagaagccaccgat
gagggcagttccaagtacgagcattttgatccatctgaggctcccaagcatatagtcagg
attccagagtcctcttccaacgaggttgtttgtgctatatgtagggataagttggttggc
gttttcgatgaggagagtggtgactggatttggcgtaatgccatcatgtatcgcagccgg
gtattgcactggtcctgctacatggaaacacgacaaagaggaaggcgatcccttggtagg
gagcgttctccacagaggtga
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