Pichia kudriavzevii: C5L36_0E04600
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Entry
C5L36_0E04600 CDS
T06133
Name
(RefSeq) uncharacterized protein
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pkz
Pichia kudriavzevii
Pathway
pkz03018
RNA degradation
pkz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pkz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
C5L36_0E04600
09123 Folding, sorting and degradation
03018 RNA degradation
C5L36_0E04600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkz03019
]
C5L36_0E04600
03041 Spliceosome [BR:
pkz03041
]
C5L36_0E04600
Messenger RNA biogenesis [BR:
pkz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
C5L36_0E04600
mRNA degradation factors
5'-3' decay
Lsm complex
C5L36_0E04600
Spliceosome [BR:
pkz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
C5L36_0E04600
Complex C
U2 snRNP components
C5L36_0E04600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF1461
Motif
Other DBs
NCBI-GeneID:
40386265
NCBI-ProteinID:
XP_029323882
UniProt:
A0A2U9RBI3
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Position
5:join(972970..973011,973101..973361)
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AA seq
100 aa
AA seq
DB search
MLFFSFFKTLVDQEITVDLKSDIKITGTLKSVDQYLNLKLDNIQVDTEKYPHFIAVKNLF
LRGTNIRYIHINPACVDTNLLQDASRREAMASAGEKIAGR
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgctttttttctcctttttcaaaacacttgtggatcaagaaataactgttgatttaaag
agtgatataaagatcacaggcactttgaagtctgttgatcaatatctcaatttgaaacta
gacaacatacaggttgatactgagaaatacccacatttcattgcagttaagaacttattc
ctaaggggcaccaacattagatacatccatatcaaccctgcatgcgttgacacgaatctc
ctccaagatgcaagtagaagggaagcaatggcaagtgcaggtgaaaaaattgcaggcaga
taa
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