KEGG   Pichia kudriavzevii: C5L36_0E04600
Entry
C5L36_0E04600     CDS       T06133                                 
Name
(RefSeq) uncharacterized protein
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
pkz  Pichia kudriavzevii
Pathway
pkz03018  RNA degradation
pkz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pkz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    C5L36_0E04600
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C5L36_0E04600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkz03019]
    C5L36_0E04600
   03041 Spliceosome [BR:pkz03041]
    C5L36_0E04600
Messenger RNA biogenesis [BR:pkz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     C5L36_0E04600
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     C5L36_0E04600
Spliceosome [BR:pkz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    C5L36_0E04600
 Complex C
  U2 snRNP components
    C5L36_0E04600
SSDB
Motif
Pfam: LSM DUF1461
Other DBs
NCBI-GeneID: 40386265
NCBI-ProteinID: XP_029323882
UniProt: A0A2U9RBI3
LinkDB
Position
5:join(972970..973011,973101..973361)
AA seq 100 aa
MLFFSFFKTLVDQEITVDLKSDIKITGTLKSVDQYLNLKLDNIQVDTEKYPHFIAVKNLF
LRGTNIRYIHINPACVDTNLLQDASRREAMASAGEKIAGR
NT seq 303 nt   +upstreamnt  +downstreamnt
atgctttttttctcctttttcaaaacacttgtggatcaagaaataactgttgatttaaag
agtgatataaagatcacaggcactttgaagtctgttgatcaatatctcaatttgaaacta
gacaacatacaggttgatactgagaaatacccacatttcattgcagttaagaacttattc
ctaaggggcaccaacattagatacatccatatcaaccctgcatgcgttgacacgaatctc
ctccaagatgcaagtagaagggaagcaatggcaagtgcaggtgaaaaaattgcaggcaga
taa

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