Parvibaculum lavamentivorans: Plav_0005
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Entry
Plav_0005 CDS
T00580
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pla
Parvibaculum lavamentivorans
Pathway
pla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Plav_0005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pla03400
]
Plav_0005
DNA repair and recombination proteins [BR:
pla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Plav_0005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
ABC_tran
AAA_15
AAA_29
DUF2813
SbcC_Walker_B
NACHT
Motif
Other DBs
NCBI-ProteinID:
ABS61628
UniProt:
A7HNZ5
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Position
4682..5920
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AA seq
412 aa
AA seq
DB search
MPRTSELLALERSASAPEISGAVVTAPLASPRARLSRLVVTDFRSYARAELALDGRPVVL
TGENGAGKTNLLEAVSLLSPGRGLRGAAYAEIARDNGEGGWAVAATLEAEHGPVRLGTGI
EPGMAPSSRSRSVRIDGEPAGPSALAAHLRIVWLTPAMDRLFVEGASERRRFLDRLVMGF
DPAHGTRAAAYERALRERSKLLADDVFDDAWLSGLESQMAEHGVALAAARLEIVARLRGA
LDVAPEGPFPRAHVALEGSLETALAEAAAVDVEDGFRARLAEMRGRDAAAGRALDGPHRS
DLLVRHTAKDREARQCSTGEQKALLIGIVLANARLLAAMGRAPLLLLDEVAAHLDAGRRA
ALFDEIVSLGLQAFMTGTDPSLFETLGERAQDLRVAHGTIQSATRYPVEGKK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcgaacgagtgagttgctcgcgctcgaacggtctgcgtccgcgccggaaatatcc
ggtgccgtcgtgacggcccctcttgcgtctccgcgcgcgaggctgagccgtcttgtcgtc
accgatttccgctcctatgcgcgcgccgagctcgcgctggacgggcgcccggtggtcctg
accggcgaaaacggcgccggcaagaccaatctgctcgaagccgtctccctgctctcgccc
ggtcgcggccttcgcggcgcggcctatgcggaaatcgcgcgggacaatggcgagggcggc
tgggccgtcgccgcgacgctcgaagccgagcatggccccgtccgtctcggcacgggcatc
gagccgggcatggcgccttcctcgcgcagccgctcggtccgtatcgatggcgagcctgcc
ggtccttccgcgcttgcggcgcatctgcggatcgtctggctgacgccggccatggacagg
cttttcgtcgagggcgcgagcgaacgccgccgctttctcgaccggctggtgatggggttc
gatccggcccatggcacgcgcgccgcggcctatgaacgggccctgcgcgagcgcagcaag
ctgctcgccgacgatgttttcgacgatgcctggttgtcgggcctcgaaagccagatggct
gagcatggcgtggcgcttgccgccgcccggctcgaaatcgtggcgcggcttcgcggtgcg
ctcgatgtggcgcccgaagggcctttcccccgtgcccatgtggcgctggaaggttcgctc
gaaacggcgctggcggaagctgccgccgtcgatgtcgaggatggctttcgcgcccgcctc
gccgaaatgcgcggccgcgatgcggctgcgggccgcgcgctcgatggtccgcacaggagc
gatctcctggtgcgccacaccgcgaaggatcgcgaggcgcgccaatgttcgaccggcgag
cagaaggcgctgctgatcggcatcgtgctggcgaatgcccggcttctcgccgccatgggc
cgcgcgccgctgctgttgctggacgaggtcgccgcgcatctcgatgccggccgtcgcgcc
gcgctgttcgacgaaatcgtgagcctcggtttgcaggctttcatgacgggcacggacccg
tcgctgtttgaaacgctgggcgagcgggcgcaagaccttcgtgtcgcgcatggcacgata
cagagcgccacccggtaccccgtggaaggaaaaaagtga
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