Parvibaculum lavamentivorans: Plav_0105
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Entry
Plav_0105 CDS
T00580
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pla
Parvibaculum lavamentivorans
Pathway
pla03030
DNA replication
pla03410
Base excision repair
pla03420
Nucleotide excision repair
pla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Plav_0105
03410 Base excision repair
Plav_0105
03420 Nucleotide excision repair
Plav_0105
03440 Homologous recombination
Plav_0105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pla03032
]
Plav_0105
03400 DNA repair and recombination proteins [BR:
pla03400
]
Plav_0105
Enzymes [BR:
pla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Plav_0105
DNA replication proteins [BR:
pla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Plav_0105
DNA repair and recombination proteins [BR:
pla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Plav_0105
NER (nucleotide excision repair)
GGR (global genome repair) factors
Plav_0105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Phage_portal
Motif
Other DBs
NCBI-ProteinID:
ABS61728
UniProt:
A7HP95
LinkDB
All DBs
Position
114688..117627
Genome browser
AA seq
979 aa
AA seq
DB search
MASGKAETAMAEKTGRALKKGDHLFLVDGSGYIFRAYHALPPLTRKSDGMPVGAVAGFCN
MLYKLIEDTKDEFEPTHLAVIFDAAAKTFRNDIYPEYKANRVEPSEDLRPQFALVRDATR
AFGVPCIEKKGYEADDIIATYARLAHEAGARVTIVSSDKDLMQLVNDNVDMLDTMKLKTI
AREQVIEKFGVPPEKVVDVQALAGDSTDNVPGVPGIGIKTAAQLIGEYGDLETLLARAGE
IKQQKRRENLIEFAEQARISRRLVELDNNVPLEEPLEGMGVREPDPETLIGFFKDMEFNT
LTRRVGERFNIDVDAIPAAGKHALITDGALAAPAGEEPKKEKQTVARTARGGTPGAVPKG
IDADFNDANYVAVTALADLDEWIARAREQGFLAVDTETDSLFPMQARLVGVSLSLLPGEA
CYIPLQHGAGGGLDFADAGGQPQIPLKEAIARLKPLLEDPSILKIGQNLKFDMTVLRQHG
IQLKGLDDTMLMSYALDAGVHGHGMDELSELHLGHKPISFAEVAGKGKAQITFDQVPVDR
ATAYAAEDADVTLRLWHILKPRLVAERRVTVYETLERPLVSVLAEMERAGVKVDKAVLAR
LSGDFSQKMAQYEDEIYELAGERFNIGSPKQLGEILFDKQSLEGGRKTKTGAWSTDADTL
EALAAKGHELPQRVLDWRGLSKLKSTYTDALPEYINPETGRIHTCYSLASTSTGRLASTE
PNLQNIPVRTEDGRKIRTAFVAEKGNLLISADYSQIELRLLAHIADIEALKKAFAEGLDI
HAMTASEMFGVPIEGMESSVRRRAKAINFGIIYGISAFGLANQLGIPRQEAGEYIDRYFK
RFPGIRAYMDDTRDFAHKNGYVETIFGRRIHLPAINSKNPAEKSFMERAAINAPIQGSAA
DIIRRAMIRMPQALADAKLAARMLLQVHDELIFEVPEKEAEKTSKVVSRIMSDAAAPAVA
LTVPLDVDARAAKNWDEAH
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagcggcaaggcggaaacggcaatggcggaaaagaccggaagagcactgaaaaaa
ggcgaccatctcttcctggtggatggttcgggctatattttccgcgcctatcatgccctc
ccgccgctgacgcggaaatcggacggcatgccggtcggcgccgtcgccggcttctgcaac
atgctctacaagctcatcgaggacaccaaggacgagttcgagccgacgcatctcgccgtc
attttcgacgccgccgccaagaccttccgcaacgacatctaccccgaatacaaggccaat
cgtgtcgagccgtcggaagacctgcgcccgcaattcgcgcttgtgcgcgacgcgacccgc
gccttcggtgtcccctgcatcgagaagaagggctacgaggccgacgacatcatcgccacc
tatgcgcgcctcgcgcatgaagcgggcgcccgcgtcaccatcgtctcctccgacaaggat
ctgatgcagctcgtgaacgacaatgtcgacatgctcgataccatgaagctgaagacaatc
gcgcgcgaacaggtaatcgagaaattcggcgtgccgccggaaaaggtcgtcgatgtgcag
gcactggcgggcgactccaccgacaacgttcccggcgtccccggcatcggtatcaagacc
gcggcccagctcatcggcgaatatggcgatctcgaaacgctgctcgcccgcgccggagag
atcaagcagcagaagcgccgcgaaaaccttatcgaatttgccgagcaggcccgcatctcc
cgccgtcttgtcgagctcgacaataacgtccccctcgaagagccgcttgagggcatgggc
gtccgcgagcccgatcctgaaacgctgatcggcttcttcaaggacatggaattcaacacg
ctgacgcgccgcgtcggcgagcgtttcaacatcgacgtcgacgccattcccgctgccgga
aagcatgccctcattaccgatggcgcgctcgctgcccccgcgggcgaggagccgaaaaag
gaaaagcagacggtcgcgcgcaccgcacggggcggcacgccgggtgcagttccgaagggc
atcgacgcggatttcaacgatgcgaattatgttgcggtaacggcgcttgccgatctcgac
gagtggatcgcgcgcgcccgcgagcagggcttcctcgccgtcgatacggagacggacagc
ctcttcccgatgcaggcgcgccttgttggcgtctccctttcgctgctgcccggcgaggcc
tgttacatcccgctgcagcatggcgctggcggcggcctcgacttcgcggatgccggtggc
cagccgcaaattccgcttaaggaggctatcgcccgcctgaaaccgctgcttgaggatcct
tccatcctgaagatcggtcagaacctgaaattcgacatgacggtcctgcgtcagcatggc
atccaattgaaaggtctcgacgacacgatgctcatgtcctacgcgctcgacgcaggcgtg
catggccacggcatggacgaattgtcggaactgcatctcggccacaagccgatttccttc
gcggaagtcgcgggcaagggcaaggcgcagatcaccttcgaccaggtgccggtggaccgc
gccaccgcctatgccgccgaagatgccgacgtcacactccgcctctggcatatcctgaag
ccgcgcctcgtcgcggagcgtcgcgttactgtttatgaaacgctggagcgtccgctcgtt
tccgttctcgcggaaatggagcgagccggcgtcaaggtcgacaaggcggtgctcgcgcgc
ctctccggcgatttttcgcagaagatggcgcaatatgaggatgagatctacgagcttgcc
ggcgaacgcttcaatatcggctcgccgaaacagctcggcgaaatcctcttcgacaagcaa
agcctcgaaggcggccgcaaaaccaagaccggcgcctggtcgaccgacgccgacacgctt
gaggcgctggccgcgaaaggccatgagctgccgcagcgcgtgctcgactggcgcgggctt
tccaagctgaaaagcacctatacggatgcactccctgaatatatcaaccccgagaccggc
cgcatccacacctgctactcgctcgcctcgacatcgaccggccgcctcgcgtcaaccgag
ccgaacctgcagaacattcccgtgcgcacggaagacggccggaaaatcagaacggccttt
gtcgccgagaagggaaatcttctcatctccgccgactacagccagatcgagttgcgcctc
ctcgcccatatcgcggatatcgaggcgctgaagaaggcctttgccgaaggtctcgatatt
catgcgatgacggcatcggaaatgttcggcgtgcccatcgagggcatggagtcttccgtt
cgccgccgcgccaaggccatcaatttcggcatcatctacggcatatccgccttcggcctg
gccaaccagctcggcatcccgcggcaggaggcgggagaatatatcgatcgctacttcaag
cgtttccccggcatccgcgcctatatggacgacacccgggatttcgctcacaagaacggt
tatgtcgaaacgatcttcggccgccgcattcacctccccgcgatcaattctaagaatccc
gcggagaaaagcttcatggagcgcgccgccatcaacgcgccgattcagggctcggccgcc
gacatcatccgccgcgccatgatccgcatgccgcaggcattggcggatgcgaagctcgcc
gcgcggatgctgctgcaggttcatgacgaattgattttcgaagtgccggaaaaggaagcc
gagaagacgagcaaggtggtgtcgcgcatcatgtcggatgccgccgcgcccgccgtggcg
ctgactgtgccgctcgatgtcgatgcccgtgccgcgaaaaactgggacgaggcgcattag
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