Parvibaculum lavamentivorans: Plav_0137
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Entry
Plav_0137 CDS
T00580
Name
(GenBank) Double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pla
Parvibaculum lavamentivorans
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pla03400
]
Plav_0137
Enzymes [BR:
pla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Plav_0137
DNA repair and recombination proteins [BR:
pla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Plav_0137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ABS61760
UniProt:
A7HPC7
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All DBs
Position
149401..152406
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AA seq
1001 aa
AA seq
DB search
MRADSLNLFTMPPGTPFLERLAATLLDDPSLGGRFKGSPELAEITILLPTRRSVRALGEA
FLRAGAGAPLLLPSIRTLGDVDEEDLILDPRGLGREALELPPAMPALERQLRLARMIVEG
QGGDETRALALAADLGHFLDMVLTEGADLTRLADLVPQDFADHWQITIDFLKVLTARWPE
ELARLGHMEQAERRNLLLRAQAEAWTAAPPPGPVIAAGSTGSIPATAALLGVVAHLPMGA
VVLPALDLDLDEESWNIIGKPGTASHPQYGMKKLLAHLRATRADVGIWPGAERSAALRSR
GRLLSEALRPAETTERWLGRLGALDGDVKDGLKGLALIEAPSERDEAGAVALLMRDVLER
PGKTAALVTPDRKLARRVAMELRRWKIDVNDSGGEPLAKTAPVAFLRLVANMVTEDLAPV
PLLACLKHPLAAAGEEPAKFRARVRRLEMHLLRGPRPAPGLDGLRAACRALEDKPGDSGE
ISILLDKIERSIAPLLNAATKKGTATSIVEAHVEAAERLAASATETGAERLWKGEAGEAA
ADFIRELMEATPAFGDIDPRFYPHFFDVLLSGRVLRPRWGRHSRLFIWGPLEARLQHADR
MILGGLNEGTWPAEANIDPWLNRPMRATMGLEPPERRIGLAAHDFAEGASAGEAFLTRAL
KVEGAPTVASRWWLRLASLLQGLEQEEAVSAPQWWQWAHKLDEPAKVLTPLRPRPVPPLE
ARPQRFSVTEIETLIRDPYAIYARKILGLKVLDPLDADIAAAERGTIIHEALEKFVEAYP
RDLPENALQELINVGEEAFRQAIGRPGVAAFWWPRFLRIAKWIVDYEQEERAGLRHIHAE
TRGEILIAELAQPVVLSGKADRIDEREDGMVNIVDYKTGTVPSIKQVEIGLTPQLPLEAA
MMARGGFRTKDGAPIPPAKAASLIYLRLTGGETAGEVRAIPDEGADLADNTYAWLVDLLR
QYEAETTPYLSRPRPMFWGRYGDYDHLARVKEWSAAGGDGE
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccgattccctgaacctcttcaccatgccgcccggtacgccgtttctcgaacgg
ctggccgcgacgctgcttgacgatccctcactcggtggccggttcaaaggcagtcccgag
ctcgccgaaatcacgatcctgctgcccacgcggcgttccgtccgcgcgctcggcgaagcc
tttctgcgcgccggcgctggcgcccctctccttcttccgtcgatacgcacgcttggcgac
gtcgatgaggaagatctcattctggatccgcgaggtctcggacgcgaagcactcgaactg
ccgccggcaatgccggcgctcgagcgtcagttacgtctcgcgcgcatgattgttgagggc
cagggcggcgacgaaacccgcgcgctcgcgctcgccgccgatctcggacatttcctcgat
atggttctgaccgaaggcgccgacctcacacgcctcgcggatctcgtgccgcaggacttc
gcggatcattggcagataaccatcgacttcctgaaagtgctgacggcccgctggccggag
gagctggcgcgcctcggccatatggaacaggcggaacggcgcaatctcctgctgcgtgcg
caggcggaagcctggacagccgcgccgccgccgggccctgttatcgcagcgggctcgacc
ggttcgatccccgccacggcggctcttctcggcgtcgtcgcccatctgccgatgggtgct
gtcgtcctccccgcgctcgatctcgatcttgatgaagagagctggaacatcatcggcaag
ccgggaaccgcctcccatccgcaatacggaatgaaaaaacttctcgctcatcttcgtgct
actcgcgccgatgtcggcatatggccaggcgccgaacgatcggcggcgctccgttcacga
ggccgcctgctttcggaagcgttgcggccggccgaaaccacggagcgatggctcggtcgt
ctcggcgccttggacggggatgtgaaggacggcttgaagggcctcgcgttgatcgaagcg
ccgagcgagcgcgatgaagctggcgccgtcgcgcttctgatgcgcgatgttctcgaaagg
ccgggcaagaccgctgctctcgttacgccagaccggaagcttgcccgccgcgttgccatg
gagcttcgccgctggaaaatcgacgtcaacgattccggaggcgaaccgctcgcaaagacg
gcgccggtcgcctttctccggctcgtcgcaaacatggtgacggaagatctggcgccggtt
ccgttgctcgcatgcttgaagcatcctctcgctgcggcaggcgaagagccggcgaagttc
agggcgcgcgtccggcggctggaaatgcatctgcttcgaggtccgcgtcctgctcccggt
ctcgacggcctccgcgcggcctgccgcgcactggaagacaagccaggcgacagcggcgaa
atttccatcttgcttgacaagattgagcgcagcatcgcgcccttgctcaacgcggcaacg
aagaaaggtacagcaacttccattgtcgaggcgcatgtggaagccgctgaacggctcgcc
gcgagcgccactgaaacgggggcagagcgtctctggaaaggggaggccggtgaggcggcg
gcggatttcatcagggaattgatggaagccacacccgccttcggtgacatcgacccgcgc
ttctacccgcacttcttcgatgtgctgttgagcggtcgcgttcttcgcccgcgatggggc
aggcattcccggctcttcatatggggcccgctcgaggcgcgtctgcagcatgcggaccgc
atgatcctcggcgggctcaacgaaggcacctggcctgcagaagcgaatattgatccctgg
ctgaaccggcccatgcgggccacaatggggctcgaaccgcctgaacgccgcatcgggctc
gccgcgcatgattttgcggaaggagcgtcagccggcgaagcgttcctgacgcgagctttg
aaagtcgagggcgcaccgacggttgcctctcgctggtggcttcgcctcgcaagtctcctg
cagggactggaacaagaagaagcggtttctgcgccccagtggtggcaatgggcacacaag
ctggatgaaccggccaaggtgctcacgccgctccgtccccgtccggtgccgccactcgaa
gcgcggcctcaaagattttcggtcacagagatagaaacgctgatccgcgatccctacgcg
atctatgcgaggaaaattctggggctaaaggtgctggaccctctcgacgcggatattgcc
gctgctgagcgcggcacgatcatccacgaagcgctggagaaattcgtcgaagcctatccc
agggacctgccggaaaacgccctgcaagaactgatcaatgtcggcgaagaggcgttccgg
caagcgatcggccgtcccggcgtcgcagctttctggtggccgcgcttcctgcggattgca
aaatggattgtggactatgagcaagaggaacgcgccggcctgcgccacatacatgcagag
acgcgcggtgaaatactgatcgccgaacttgcccagcccgttgtcctgagcggcaaggcc
gacaggatcgacgaacgcgaagacggcatggtcaatattgtggattacaaaacgggcacc
gttccgagcataaagcaggtcgagatcggtttgacgccgcagcttccccttgaggcggcg
atgatggcgagaggcggtttccggacaaaggacggcgcgcctatcccgccggcgaaagcg
gcaagtctgatatatctgcggctcacaggcggcgaaacggcgggcgaagttcgcgcgatt
ccggatgagggcgcggatctcgcggacaatacctatgcatggctcgtcgatctgttgcgc
cagtacgaggcggagacgacgccctatctctcccgcccgcggccgatgttctggggacgc
tatggcgattacgaccatctggcgcgtgtgaaggagtggtcggcggcggggggagacggc
gaatga
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