KEGG   Parvibaculum lavamentivorans: Plav_0386
Entry
Plav_0386         CDS       T00580                                 
Name
(GenBank) helix-turn-helix domain protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
pla  Parvibaculum lavamentivorans
Brite
KEGG Orthology (KO) [BR:pla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pla03000]
    Plav_0386
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pla02048]
    Plav_0386
Transcription factors [BR:pla03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    Plav_0386
Prokaryotic defense system [BR:pla02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    Plav_0386
SSDB
Motif
Pfam: Peptidase_M78 HTH_3 HTH_31 HTH_26 HTH_25 HTH_19 HTH_23 HTH_37
Other DBs
NCBI-ProteinID: ABS62009
UniProt: A7HQ26
LinkDB
Position
417292..418560
AA seq 422 aa
MAIGMILNERELKEARAKISALNEALSSERALEPMVAGLPPEVVLQVTHALKAERKELTS
SVEAYEQAKDDGNYKNMRQKAGGDPGLALIVARIARGLTQRDLAWRLGLKEQQVQRYEAD
RYSTISLKNYTKIALLLGVQLRADIQEFGGLDQVIENVSKQSIRKILSHGRQHGWFSEEN
DEQELRKLIAENRIDFGSPSLLRTGLNVKDYSEDILLHAWRARVSNRAQEIIDASRPEFE
PLELTWLSDLVKLSVHEAGPLEAQNMLLQHGIILVVEPQIPGLAIDGAAFLQGDVPVIGM
TIRKDSIDNFWFTLLHELAHVLLHYRMGLAVGFFDQIEAESVDAMEAEADAFASSILIPD
ELWRRSSARIAQSPTVIEKFAAELGIHASIVFGRIRKERNDYSIFSQKIGGKKVRTLFVS
ST
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggctatcggtatgattctcaacgaacgcgaacttaaagaagcgcgcgcaaaaatttcc
gcccttaatgaggcgttgtcctcggagcgggctttggagcctatggttgcagggcttcca
cctgaagttgtgcttcaggtgacgcacgccctaaaggctgagcgcaaagaactaacatcc
tccgtagaagcttatgagcaagctaaggacgacggaaattataagaacatgcgccaaaag
gccggtggtgatcccggcctggccttaattgttgcgcgaattgctagagggctaactcag
cgtgatttggcgtggaggcttggccttaaagaacagcaagtacaacggtatgaagctgat
cggtacagtactattagcttgaagaattacaccaagattgcccttctgcttggtgtccag
ttgcgcgccgacattcaggaatttggcggtctcgaccaagtgatagagaatgtttcaaaa
caaagtatacggaagattcttagtcacgggcgccaacacggatggttttctgaggaaaat
gacgaacaggaacttcgtaagctaatcgcggagaaccgcattgattttggcagcccgtcc
ttgttgcgcacagggttaaacgtcaaagactacagcgaagatattttgcttcatgcttgg
cgtgcgcgggtctcgaatagggcgcaggaaataattgatgcgagtcgtccagagtttgag
ccgttagagctgacttggctctccgatttggtgaagctaagtgttcatgaagcggggcca
ctagaagcgcagaacatgctcttgcagcatggaataattctggtggtcgaaccgcagatt
cccggccttgcaattgatggagccgcttttttgcaaggagatgttccggtcatcgggatg
accatccgaaaagactccattgacaatttttggttcacgcttctgcacgagctggcacat
gtgcttctccattatcgaatggggttggcggttggatttttcgatcaaatagaagcggaa
tcagtggatgctatggaggcagaggctgatgcattcgcgtcaagcatcttgataccggac
gaactatggcgtcgatcatcggcaagaatagctcagtcacctacagtgattgagaaattt
gcagctgaacttgggatacacgcttcaatagtgtttggcagaattagaaaagaaagaaac
gactactcaattttttcacagaaaattgggggaaaaaaagtgcgtactctgttcgtgtct
tcaacgtaa

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