Parvibaculum lavamentivorans: Plav_0506
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Entry
Plav_0506 CDS
T00580
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pla
Parvibaculum lavamentivorans
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pla03032
]
Plav_0506
03036 Chromosome and associated proteins [BR:
pla03036
]
Plav_0506
03400 DNA repair and recombination proteins [BR:
pla03400
]
Plav_0506
DNA replication proteins [BR:
pla03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Plav_0506
Chromosome and associated proteins [BR:
pla03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Plav_0506
DNA repair and recombination proteins [BR:
pla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Plav_0506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Sp-DndD
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ABS62129
UniProt:
A7HQE6
LinkDB
All DBs
Position
547216..547557
Genome browser
AA seq
113 aa
AA seq
DB search
MATKPAAKKAPAAAAAKKAPTAPTVPMSKLIAEIAEKHDLSKKAATELFSDFVELTVKNL
KKGNKVRLTGLGILQVRKRAARMGRNPATGEAIKIKASKKVAFRVAKDLKEAI
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggccactaaacccgctgccaaaaaggcgcctgccgccgctgctgccaagaaggcaccg
acagcgccgacggttccgatgtcgaagctgattgccgaaatcgccgagaagcacgatctc
tcgaagaaggcggcaaccgagctcttcagcgacttcgtcgaattgacggtgaagaacctg
aaaaagggcaacaaggtccgtctcaccggtctcggcatcctgcaggtgcgcaagcgcgcc
gcccgcatgggccgcaatccggcgacgggcgaagccatcaagatcaaagcctccaagaag
gtcgccttccgcgtcgcgaaggacctgaaggaagccatctaa
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