Parvibaculum lavamentivorans: Plav_0528
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Entry
Plav_0528 CDS
T00580
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pla
Parvibaculum lavamentivorans
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pla03019
]
Plav_0528
03009 Ribosome biogenesis [BR:
pla03009
]
Plav_0528
Messenger RNA biogenesis [BR:
pla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Plav_0528
Ribosome biogenesis [BR:
pla03009
]
Prokaryotic type
rRNA processing factors
Plav_0528
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ABS62151
UniProt:
A7HQG8
LinkDB
All DBs
Position
566193..567713
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AA seq
506 aa
AA seq
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MSEEVLINVGPGETRVAIVEDGRPVELFLERTMEDDLKAKTGRAGHSLIGNIFLGRVQRV
LPGMQAAFVEVGLERAGFLGAREARCLCELTGLDEGTLPPISACVQEGQTILVQAVKDPI
SDKGARLSANVTIPGRLLVLVPNQSGVALSRRIEDEPERERLAALVEEMVERFNPMGVTG
EPAGFIVRTAAIGATAEDIAADARQLAEEWRKVRETEKRSTAPCVVFHDLDPVSKTLRDC
VSADTSRVLIDCADAFGEAQRYCRRAMPEMLDRIQLFNGPGQLFSLYDVDGEIEAALEPR
AELPSGGWITVETTEALTAIDVNSGRYTAATGLEETSVKINLEAVHEIVYQLRLRGTGGL
IVIDFIHLNDPANIQKVIDALNEGFAKDRVPTQISGMSEFGLVEMTRKRVREPLDKLLTE
PAYPHGRPRRKTCATMANDLLRRIAREAQATPGRPLVARASVEVVDWLERGNPYLVERLR
RKVPADISLIGEPAFPRERIDVGIVQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaagtattgatcaatgtcggtcccggcgagacgcgcgtcgcgatcgttgag
gacggacgtccggtggagctctttctcgagcgcaccatggaggacgacctgaaggcaaag
acaggtcgcgccggccattcgcttatcggcaatatttttctcggccgcgtgcagcgcgtg
ctgccgggcatgcaggcggcgtttgttgaagtcggcctcgagcgcgccggctttctcggc
gcgcgcgaggcgcgttgcctgtgcgagctgacaggcctcgatgaaggcacgctgccgccg
atcagtgcctgcgtgcaggaaggacagacgatcctcgtgcaggcggtgaaggacccgatc
agcgacaagggcgcgcggctttccgccaatgtaacgatccctggccgtcttctcgtcctc
gttcctaatcagtccggcgtcgccctctcgcgccgcatcgaagacgaaccggaacgcgaa
cgcctcgcggcgctcgtcgaggaaatggtcgagcgtttcaatccgatgggcgtcaccggc
gagcctgcgggctttatcgtccgcaccgccgccatcggcgcaactgccgaggacatagcc
gccgatgcgcgccagctcgccgaggagtggcggaaggtgcgcgagacggaaaagcgttcc
accgcgccctgtgtcgtcttccacgacctcgatcctgtttccaaaacgctgcgcgattgc
gtcagcgccgatacctcgcgcgtgttgatcgactgcgccgatgccttcggcgaggcgcag
cgttattgccgccgcgccatgccggaaatgctcgaccgcattcagcttttcaacggcccc
ggtcagttgttctcgctctacgatgtcgatggcgaaatcgaagcggcactggagccgcgc
gccgagcttccgtcgggcggctggatcacggtcgaaaccacggaagcgctgaccgcgata
gacgtcaattcaggacgctacacggcagcgacgggcctcgaagagaccagcgtcaagatc
aacctcgaagccgtgcacgaaatcgtctatcagcttcgcctgcgcggcaccggcggtctc
atcgtcatcgacttcatacacctgaacgatcccgccaatatccagaaggtgatcgacgcc
ttgaacgaaggcttcgcgaaggaccgcgtgccgacgcagatttccggcatgtcggaattc
ggcctcgtcgagatgacgcgaaagcgtgtgcgcgagccgctcgacaaattgctcaccgag
cccgcctatccgcatggccgcccgcgccgcaagacctgcgcgacgatggcgaacgatctt
ctgcgccgtatcgcccgcgaagcccaggcgacccccggccgcccgcttgttgcgcgcgcc
tcggtggaagtcgtggattggctcgagcgcggaaatccctatctcgttgagagattgcgc
cggaaagttcccgccgatatcagcctgatcggtgagcccgctttcccgcgcgagcgcatc
gatgtaggcatcgtgcaatag
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