Parvibaculum lavamentivorans: Plav_0608
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Entry
Plav_0608 CDS
T00580
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pla
Parvibaculum lavamentivorans
Pathway
pla00260
Glycine, serine and threonine metabolism
pla00460
Cyanoamino acid metabolism
pla00630
Glyoxylate and dicarboxylate metabolism
pla00670
One carbon pool by folate
pla00680
Methane metabolism
pla01100
Metabolic pathways
pla01110
Biosynthesis of secondary metabolites
pla01120
Microbial metabolism in diverse environments
pla01200
Carbon metabolism
pla01230
Biosynthesis of amino acids
pla01240
Biosynthesis of cofactors
pla04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Plav_0608
09102 Energy metabolism
00680 Methane metabolism
Plav_0608
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Plav_0608
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Plav_0608
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Plav_0608
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Plav_0608
Enzymes [BR:
pla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Plav_0608
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
SelA
Motif
Other DBs
NCBI-ProteinID:
ABS62231
UniProt:
A7HQP8
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All DBs
Position
complement(672989..674251)
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AA seq
420 aa
AA seq
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MTTSQERARLAQSDNEIFLALKGEEARQRAGLELIPSENYAFPEVLTLLGSAFTNKYSEG
YPGRRYYGGQDYTDRIETLARDRAKALFRAEHANVQPLSGSPMNQAVYLGLLEPGDTILA
MDLSHGGHLTHGAPVSHMGRLFNFVRYKTDPTNGAIDFDHLRAVARETKPRLVVCGYSSY
PRDYDYADFKRVADEVGALTMADVSHIGGLIAANVMRNPLDAGFDVMTTTTHKSLRGPRG
GLILCKAEFARKIDASVFPGLQGGPHMNQVAAAAVTFRLAAMPAFRDYAEQVLANAKALA
AALMERQVKLVTGGTDNHLLVIDTVASFGIDGAVAQEALDRVGLTTNKQVIPDDPNPPMR
PSGLRLGTPAATARGMGHKEMAEIAEIIAAALNAKGDAATETALAARTHKLTSRFPVDGL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctcacaggaacgagcccggctcgcccaatccgacaatgaaatctttctcgcg
ctcaagggcgaggaagcgcggcaacgcgcgggcctcgaactcatcccgtcggaaaactac
gccttccccgaagtgctgacgctgctcggctccgccttcaccaataaatattcggaaggc
tatcccgggcggcgctattacggcggacaggactatacagaccgtatcgaaacgctggcc
cgcgacagggccaaggctctcttccgcgcggagcacgcgaatgtgcagccgctgtccggc
tcgccgatgaaccaggcagtctatctcggcctgctcgagcccggcgatacgatccttgcg
atggatctcagccatggcggtcatctcacgcatggcgcgccggtcagccatatgggccgc
ctcttcaatttcgtgcgctacaagacggaccccacgaacggcgccatcgacttcgaccac
ctccgtgccgtcgcacgggagacgaagccgaggctcgtcgtctgtggctactcttcttac
ccgcgcgactacgactacgcggatttcaaacgcgttgccgacgaagtgggcgcgctcacc
atggcggatgtttcccatatcggcgggctcatcgcggccaacgtcatgcgcaacccgctg
gatgcgggcttcgacgtgatgacgacgacgacgcacaagtcgctgcgcggcccgcgcggc
gggctcattctctgcaaggctgagttcgcgaggaagatcgacgcttccgtgttccccggc
cttcagggcggtccgcatatgaatcaggtcgcggcagccgccgtcaccttccgcctcgcc
gccatgcccgcgttccgcgattacgcggaacaggtcctcgccaacgccaaggcgctcgcc
gctgcactcatggaacgtcaggtgaagctcgtcaccggcggcaccgacaatcacctcctc
gtcatcgacacggtcgcgagtttcggcatcgacggcgcggtggcgcaggaggcgctcgac
cgcgtcggcctcaccaccaacaaacaggtgatcccggacgatccgaacccgccgatgcgc
ccgtccggccttcgtctcggcacaccggcagcaacggcgcgcggcatggggcacaaggaa
atggcggagatagccgaaatcatcgccgccgcgctcaacgcgaaaggagacgccgcaacg
gagacagcgctcgccgcccgcacgcacaagctcacttcgcgcttccccgtggacgggctc
tag
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