Parvibaculum lavamentivorans: Plav_0620
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Entry
Plav_0620 CDS
T00580
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pla
Parvibaculum lavamentivorans
Pathway
pla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Plav_0620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pla03400
]
Plav_0620
Enzymes [BR:
pla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Plav_0620
DNA repair and recombination proteins [BR:
pla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Plav_0620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
ABS62243
UniProt:
A7HQR0
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All DBs
Position
686459..687892
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AA seq
477 aa
AA seq
DB search
MPPSDTQSPAANNAHEFSVSEISFALKKTVEETFGHVRVRGEITGYRGPHSSGHCYFGLK
DDKARMDAVIWKGNFGKLRFKPEEGMEVIATGKLTTYPGSSKYQIVIDHLEPAGVGALMA
LLEERRKKLAAEGLFAAERKRALPFLPEVIGVVTSPTGAVIRDILHRLQDRFPRHVIVWP
VRVQGETSAAEVAAAIRGFNAMEKGGKTPRPDLLIIARGGGSIEDLWSFNEEIVVRAAAE
SAIPLISAIGHETDTTLIDFASDRRAPTPTAAAEMAVPVRAELLADVRDKGSRLIRCEAR
AIESYRTQLGGLARGLPKLQDLVALPRQRFDTAADRLGRALIRAAEVKRARLSRVEGRLS
DRPIRLRIANERKGLPQLLQRLTRAETRRVADLARSLDGSTKLLESYSYHGVLKRGYAVV
RDETGKPIRAGAGQTAGARIEIEFAEDRLDAVVAPGGTVAPRKAPPKKPGGGQGSLL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcccccttcggacacacaaagccccgccgccaacaacgcccatgaattctcggtcagc
gagatttccttcgcgctgaagaagacggtggaggagaccttcggccatgtccgcgtgcgc
ggcgagattacgggatatcgggggccgcattcctccggccattgctatttcggcctgaag
gacgacaaggcacggatggacgccgtgatctggaaggggaatttcggcaagctccgcttc
aagcccgaagagggcatggaggtgatcgcgacggggaagctgacgacctatccgggtagc
tccaaataccagatcgtgatcgaccatctggagcccgccggcgtcggcgcgctgatggcc
ctgctggaggaacggcggaagaagctcgccgccgaaggattgtttgccgccgagcgaaag
cgcgcgctgccgtttctccccgaggtgatcggcgtggtgacgagcccgaccggcgccgtc
atccgcgacattctccaccgcctgcaggaccgtttcccgcgccatgtcatcgtctggccg
gtgcgcgtccagggcgagacgagtgcggcggaagtggccgccgcgattcgcggcttcaac
gcgatggagaagggcgggaagacaccgaggccggatttgctgatcatcgcgcggggcggc
ggctcgatagaagacctctggtcgttcaacgaggaaatcgtcgtgcgggcggcggcggaa
agcgcgatcccgctgatctcggccatcggccacgagacggacacgacgctgatcgacttc
gcctccgaccgccgcgcgccgacgccgacggcagccgcggaaatggcggtgccggtgcgg
gcggaactcctcgccgatgtgcgggacaagggctcgcggctcatccgctgcgaggcccgc
gccatcgaaagctaccgcacgcaactgggcgggctggcgcgcggcctgccgaagctgcag
gacctggtggcgctgccccgccaacgcttcgatacggcggcggaccggctcggccgcgca
ttgataagggcggcggaagtgaagcgcgcgcggctttcccgcgtcgaggggcggctctcc
gaccggccgataaggctgcggatcgcgaatgaacggaaaggcctgccgcaattgctgcaa
cggctgacgcgggcggagacaagacgcgtcgccgatctcgcccgctcactcgatggctcc
acgaagctgctggagagctattcctatcatggcgtgctgaagcgcggctatgcggtggtg
cgcgacgagacgggcaagcccatccgcgccggcgcgggacagacggcgggcgcgcgcatc
gaaatcgaattcgcagaggacaggctcgacgccgtggtcgcgcccggcggcaccgtcgcg
ccgcgaaaggccccgccaaaaaagcccggcggcggacaaggcagcctgctttga
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