Parvibaculum lavamentivorans: Plav_1218
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Entry
Plav_1218 CDS
T00580
Name
(GenBank) putative methylase/helicase
KO
K26273
protein strawberry notch
Organism
pla
Parvibaculum lavamentivorans
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pla03036
]
Plav_1218
Chromosome and associated proteins [BR:
pla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
Plav_1218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
AAA
Motif
Other DBs
NCBI-ProteinID:
ABS62838
UniProt:
A7HSF5
LinkDB
All DBs
Position
complement(1348094..1352413)
Genome browser
AA seq
1439 aa
AA seq
DB search
MNIMSPVAGPAAPVARASAIIAAAHQLLTLLERGQRMDNADLRIAMETAFEASDTSGAWD
WKTAYEACEGATVLFLRKYGRALFRKAGTPAARLSALSKITGLLPTHTRRSEEAQALQQF
STPVPLGLAAIAAAAITTHDIVLEPSAGTGLLAILAEISGGSLLLNELAETRADLLGQLF
PALAVTRCDAAQIDDHLPACAVPSVIVMNPPFSVMEHVSGRVADAAARHVASALARLADG
GRLVTITGANFGPEQPAWRDTFARLQVRGRVVFTAAIHGSVYAKHGTSIETRLTVIDKLP
AEDPATFPASAGVAPDVATLLAWIEARIPPRLPVALPDIAPPVSGSAPRTVRGYLARTAT
ERPAARSTMDPQGVELAYDTMDWTPPEGAHLTDAIYEEYGLQSIRIASSQAHPTKLVQSA
AMASVAPPKPAYRPMLPANITDLLSDAQLETVIYAGEAHSDFLTGSWTVDATCDLVQAAK
PDAENAVRFRRGFMLGDGTGAGKGRQSAGIILDNWLRGRRKAVWISKSDKLIEDAQRDWS
ALGMERLLVTPLSRFAQGRPITLSEGVLFATYATLRSDDRGEKVSRVRQIVEWLGSDFDG
VIIFDESHAMANAAGGKGERGDVSASQQGRAGLRLQHALANARVVYVSATGATTVHNLAY
AQRLGLWGGEDFPFATRAEFVEAIEDGGVAAMEVLARDLRALGLYTARSLSYDGVEYELI
EHDLTDEQRRIYDAYASAFAVIHNHLDAAMQAANITGNPDSGGATLNRQAKSAARSAFES
AKQRFFGHLLTSMKTPTLIRSIERDLDDGHAAVVQIVSTGEALMERRLAEVPTKEWNDIR
VDITPREYVLDYLAHSFPVQLYEPFTDGEGNLSSRPVYRDGHPVESREAVARRDELIERL
ASLPPVPGALDQIVQRFGTDMVSEVTGRSRRIVRKGERFAVENRAPSANLAETAAFMDDL
KRVLVFSDAGGTGRSYHAELSAKNRRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLF
RPIATNVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESSYARDALRQLYL
LIVRGKVEGCSLGRFESATGLKLTDDNGIKDELPPITTFLNRLLALTIELQGILFTAFEQ
LLDAKVAGAIASGVYDVGLETLTAESFVVAERTTIYTHPATGAQTRLLTITERRRNQPTT
LDTALDWLDDPHARLLINARSGRAAVQVPAPSIMLDDGEIERRVRLIRPMEQHHASLAMM
EDSYWQEAARDSFAAVWQREVAEVPAYTDGAIHMVSGLLLPVWKRLPNESTRVYRLQTDD
GERIIGRRVSSAWALNAASTGTANLSSDDAYAALVDGRTILDLASGLQLRRARVMGANRI
ELSGFTDTMRDRLRAYGLFSEIISWKLRFFVPVDASGPAIIGKLLATYPVERISEREAA
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatgtcccccgtagccggtccggctgcgcccgttgcccgcgcgtccgccatc
atcgccgccgcccatcagcttctcaccctgctcgaacgcggccagcggatggacaacgcc
gatctccgcatcgccatggaaacggccttcgaggcttccgacacgagcggcgcttgggac
tggaagacggcctacgaagcctgtgaaggcgcgaccgtcctgttcctgcgcaaatacgga
cgtgcgcttttccgtaaagccggcactccggctgcacggctttccgctttgtcgaaaatc
accggccttctgccgacgcacacccgtcgctccgaggaagcccaggcgcttcagcaattc
tcgacgccggtcccgctcggcctcgccgctatcgcggccgccgcgatcacaacgcacgac
attgtgctggagccgtcggcaggcacgggtcttctcgccatcctcgccgagatcagcggc
ggctcgctgcttctcaacgaactggcggaaacccgcgccgatctacttggccagctcttt
cccgcccttgccgtcacgcgatgcgacgccgcccagatcgacgaccaccttccggcgtgc
gccgtcccttccgtcatcgtgatgaacccgcccttctcggtgatggagcacgtctccggc
cgggtcgccgacgccgctgcgcgtcatgttgcttcggccctggcgcggcttgccgatggt
gggcgtctggtgacgatcaccggcgcaaacttcggccccgagcaaccggcctggcgcgac
accttcgcccggcttcaggtgcgtggccgcgtcgtcttcaccgcggcgatccacggctcg
gtctatgccaagcatggcacgagcatcgaaacgcggctgaccgtcatcgacaagctgccg
gccgaagacccggccacgttccctgcgtccgctggcgttgcgcccgacgtcgccacgctg
ctcgcatggatcgaagcgcggattccaccgcgcctgccggtcgcactgcccgacatcgcg
ccgcccgtgtcgggttcggcaccccgcaccgtgcggggttatctcgcgcgcaccgccaca
gagcgtccggccgcacgctccaccatggatccgcagggcgttgaactcgcctacgacacg
atggactggacgccgccggaaggcgcccacctcacggatgcgatctatgaagaatacgga
ttgcagtcgatccgtattgccagttctcaggcgcaccccaccaagctcgtgcagtcggcg
gccatggcgagcgttgcaccgcccaagcccgcctatcggccgatgctgcccgcgaacatc
accgatctcctgtcggacgcccagctcgaaaccgtcatctatgccggcgaagcccattcg
gacttcctcaccggctcctggaccgtcgatgcgacctgcgatctcgtgcaggcggccaag
cccgatgccgaaaacgccgtgcgcttccggcgcggctttatgctcggcgacggcaccgga
gccggcaaaggccgtcaatctgccggcatcatcctcgacaactggctgcgcggtcgccgc
aaggcggtctggatctccaaatccgacaagctgatcgaggacgcgcagcgcgattggtca
gcgctcggcatggagcgcctgctggtcacgccgctgtcgcgcttcgcgcaagggcggccg
atcacgctgtcggaaggcgtcctgtttgcaacctatgccacgctacggtccgacgaccgt
ggtgagaaggtttcccgcgtccggcagatcgtcgaatggttgggctccgatttcgatgga
gtgatcattttcgacgagagccacgccatggccaatgccgcaggcggcaagggagaacgc
ggcgacgtttccgcctcacagcagggacgcgcgggccttcggcttcagcacgccctggcc
aacgcgcgcgtcgtctatgtgtcggctaccggcgcgaccaccgtccacaatctcgcctat
gcccagcggctcggcctgtggggcggtgaggatttccccttcgccacccgcgccgaattt
gtcgaggcgatcgaggacggcggtgtcgcggccatggaagtgctcgcccgcgatctgcgt
gcactgggcctctataccgcccgatcgctctcctacgatggcgtcgaatacgagctgatc
gagcacgacctgaccgacgagcagcggcgtatctacgatgcctacgccagcgccttcgcc
gtcatccacaatcatctcgacgccgcgatgcaggcggccaacatcaccggcaacccagat
agcgggggagccacactgaaccgccaggccaagtccgccgcccgctcggccttcgagtcc
gccaagcagcgtttcttcggccatctgctcacgtcgatgaaaacgcccacgctgatccgg
tccatcgaacgcgacctggatgatggccacgccgctgtcgtccagatcgtctcgaccggc
gaagcgctgatggagcgccggctggcggaagtcccgaccaaggaatggaacgatattcgt
gtcgacatcacaccccgcgaatatgttctggactatctggcccattcctttccggtccaa
ctctacgagccgttcacggatggcgagggcaatctgtcctcgcgcccggtctatcgcgat
ggccaccccgtcgagagccgcgaagctgtcgcgcgccgggacgagctgatcgaacgtctt
gcgtctttaccacccgttccgggggcgctcgaccagatcgtacagcgcttcggcacagat
atggtctccgaggtgacgggccgctcccggcgcatcgtccgcaagggggaacgcttcgcc
gtcgaaaaccgcgcgccatccgccaaccttgccgagacggccgcgttcatggacgatctg
aagcgcgttctcgtgttcagcgacgccggcggcaccggccgcagctatcacgcagaactg
tcggcgaagaaccggcgtctgcgcgtgcattatctgctcgaacccggatggaaggccgac
gccgccatccagggtctgggccgcaccaatcgcaccaaccaggcgcagccgccgctgttc
cgcccgatcgccacgaacgtcaaagccgagaaacgcttcctgtccacgatcgcgcgccgg
ctcgatacgctgggcgcgatcacgcgcggtcagcgccagaccggcggccaaggcctgttc
cggcccgaggacaatctggaatcgagctacgcccgcgatgcgctgcggcagctctatctc
ctgatcgtgcgcggcaaggtcgagggttgctcgctgggtcgcttcgagtccgcgaccggc
ctgaaattgaccgatgacaacggcatcaaggacgagttgccgccgatcaccacgttcctc
aaccgcctgctggcgctgaccatcgagcttcagggcatcctcttcaccgccttcgagcaa
ttgctcgacgccaaggtggccggagccatcgccagcggcgtttatgatgtcgggctggaa
acgctgacggcggagagtttcgtcgtcgctgagcgcacgaccatctacacccatccggca
acgggcgcacagacgcggctgctcacgatcaccgagcgccgccgaaaccagccaaccacg
ctcgatacggcgctcgactggctcgacgatccgcatgcccggctgctcatcaacgcgcgg
tcgggacgcgctgctgtccaggtgccggcgccgtccatcatgctcgacgacggcgagatc
gaacgtcgcgtccgcctgatccggccgatggaacagcaccacgcaagcctcgccatgatg
gaagacagctattggcaggaagccgctcgcgacagctttgcagcggtctggcaacgggaa
gtcgccgaagtgccggcctataccgatggcgccatccacatggtcagcggtttgctcctg
ccggtgtggaagcgcctgccgaacgagtcgacgcgcgtctatcggctccagaccgacgat
ggcgaacgcatcatcgggcggcgggtttcgtccgcctgggccctgaatgccgcctcgacg
ggaacggccaacctcagcagcgatgatgcctatgccgctctggtggatggtcgcaccatc
ctcgacctggccagcggactccagcttcgccgcgcgcgcgtcatgggcgcgaaccggatc
gaactgtccggcttcaccgacaccatgcgggatcgcctgcgcgcctatggcctcttcagc
gagatcatctcgtggaagctgcgcttcttcgtcccggtcgatgcctctggtcccgccatc
atcggcaagctgctcgccacctatccggtcgagcggatcagcgagcgtgaggcagcgtga
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