Parvibaculum lavamentivorans: Plav_1470
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Entry
Plav_1470 CDS
T00580
Name
(GenBank) NUDIX hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pla
Parvibaculum lavamentivorans
Pathway
pla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Plav_1470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pla03019
]
Plav_1470
Messenger RNA biogenesis [BR:
pla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Plav_1470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ABS63090
UniProt:
A7HT57
LinkDB
All DBs
Position
complement(1603272..1603799)
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AA seq
175 aa
AA seq
DB search
MPRHSDKKEPVAPETLPYRPCVGIMLINREGLVWVGNRIQEVDTGSTLTWQMPQGGIDEG
ESPEEAARRELMEETGTDKAQIVGETKDWLTYELPPHLVGIALKGKYRGQKQKWFAMRFT
GEDSDIDIAADDHQEFSEWTWVPIEELLELIVPFKRSVYERLVREFAPFAVPQEG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccacagcgacaagaaggaaccggtcgcaccggagacgctgccttaccggccc
tgcgtcggcatcatgctgatcaaccgcgaaggacttgtctgggttggcaaccggatacag
gaagtcgacacaggaagcacgctgacatggcagatgccgcagggcggcatcgacgaaggc
gagagcccggaggaagcggcacggcgcgagctgatggaagagacgggtacggacaaagcg
cagatcgtcggcgagacgaaggactggcttacctacgaattgccgccgcatcttgtcggc
attgcgctgaagggaaagtatcgcggacagaagcagaaatggttcgccatgcgcttcacc
ggcgaggattccgacatcgacattgcagccgacgatcatcaggaattcagcgaatggaca
tgggttccgatcgaggaattgctggagctgatcgtgcctttcaagcgcagtgtttacgag
cggctggtgcgggaattcgcgcctttcgcggtgccgcaagagggctga
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