Parvibaculum lavamentivorans: Plav_2325
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Entry
Plav_2325 CDS
T00580
Name
(GenBank) outer membrane autotransporter barrel domain
KO
K19231
fibronectin-binding autotransporter adhesin
Organism
pla
Parvibaculum lavamentivorans
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pla02000
]
Plav_2325
Transporters [BR:
pla02000
]
Other transporters
Pores ion channels [TC:
1
]
Plav_2325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
ABS63939
UniProt:
A7HVK6
LinkDB
All DBs
Position
complement(2498450..2503798)
Genome browser
AA seq
1782 aa
AA seq
DB search
MGVASGNRVATGRRTMRVTTWRFMRLRRKAVPPVILRRNLTRRLLSSVGVAALLAGVSLA
LLPAPTRADTSWTGAADSDWNNAANWSNGLPVNTSGTTKIEGPVAATVDGVSVADSGRTN
IGSAAQDGSLIVQGGGTLNAGVFELFGYNGFSGTATIRGAGSGISTSSSLFVGAYTGVGH
IFIEDGGTLTTPYSTYMSQYNGSLGTVTVTGSGSTWNSNYEINLGGAEGNYDATGILTIA
DDGLVNINNGNRNLNVAKSTGSTGTLNIGAAEGDAAVAAGSLQAKSVVFGAGDGTLVFNH
TETDYTFAPSISGNGGVHQLAGTTNLSGSNSWSGSTLVEGGILRAGAAGALSANAAYTVN
GGTLDLNDFDLTATELSGTGGTVDLGTAELEVDQDGDSVFDGLIAGAGSLVKLGSGILSL
TGANTYSGGTTLGEGTLRLEDDDAIGTGALTVTGGTLDYDDGIDLSNDIDLRAQATLNVT
TGSATQSGNIGETGGSFGIVKSGAGILSLTGANTYTGTTTVSGGTLRAGSADALVSGAYI
LNGGTLDLNDFDLSASGLSGASGTVDLGSAELEVDQDSDGVFGGIISGAGSLLKLGSGML
TLTGGSTYTGLTTIREGTLALDGGSVESSDDVIIGDLAHTVGEVTVTGAGASLDTDSSVL
VGELGEGTLNVENGGVVTADVVIAGHLSGSDGAIRVTGTGSQVNSTSLLRIGDEGVGRLI
VSEGGAVTNTSTGYIGAGTNGEGAMTVTGTGSKLDNSGILYVGGEYNGAIGVLTVAGEAA
VNVGAGSGTVRVAHHSGATGTLNIGAAEGDAAVAAGTLNAASLQFGAGTGQIVFNHLDDD
HAFSSDVSGAGEVLHLSGTTILTGENTYTGGTTVSGGTLRAGRVGAFTSGGYEVNGGTLD
LNDFDLSMSELSGIGGAVDLGSAALAVGSGNTDANFAGVISGIGSLEKTGLGSFTLAGAN
SYTGGTTVSGGTLRAGAASAFVDGSAYTVDGGTLDLNDFDLSMSELSGTGGTIDLGGATL
TVGSGNTFTNFAGAIEGTGGLEKTGTGELTLTGANSYTGGTTISGGTLEGSTSSLVGDIV
NNATLAFTQAFDGTFGGVISGTGSLVKSGSGVLTLTGANSWSGGTTIRHGTLEGSTSSLT
GDIVNDAALVFAQAGDGTYAGAVSGTGSLEKTGAGTLTLTGANGYTGGTTVSGGTLAGNT
SSLQGDIVNNASLLFDQSADGTYAGVLSGNGDIVKSGAGSLVLSGISGAFTGGLEVLSGS
LVVDGTFGGGLLVSGGFLGGSGTVGSTTLGGGATLAAGNSIGTLTVAGDLAFSAGSVLAV
EVNDGGDAAGVNADFVHVTGAATIASGAVVEVAPANGTDDGITYAPSTTYRILTADGGIS
GVFDGVTAGFAFLMPEVSYDATNVFLILTQMAAFEDVASTPNQQGVAAAAEALGAGNPLY
DEIIGMSEEEAQAAFDALSGEAHASSTGVFSSSAGIVRRTIFSRLFSRFGAPRGFAAAEG
YVPAAGDETPHGYTVWGELVRGWGETDGSVSAAGIERNSTGFLGGVDREIGEASRIGIAL
GYSHATFDVSGRASSGESDNFHVAGYAGTELGPMDLKGVLGYSYQMAESRRRVVVGGVID
DLSADYGAHTFQASGEASVDLAAGPVTLTPFAGLAVVHVETEAFTETGGPSALSIASSSN
TTGISELGLRAAREAGSLTLFGSASWRHVFGDVEPLSRASFASSPATTFSVRGTPLSEDV
ASIGGGVELLIAEETTLEFSYRGEFASDSRDHGLKAKVSIRF
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggcaagcggaaatcgggtagcgacagggcggcgcaccatgcgtgtaaccact
tggcgcttcatgcgtctgcggcgcaaggctgtgccacccgtcatcctccgacgcaatctg
acgcggcgtctcctctccagcgtcggcgttgccgcccttctcgcgggtgttagcctcgcg
cttcttccagcccccacccgcgcggatacctcatggacgggcgctgccgacagcgactgg
aacaacgcagccaactggtcaaacggtctgccggtcaacacttcgggaacgacgaagatc
gaagggccggtcgccgcgactgtcgatggtgtcagtgtggcggactctggccgcaccaat
atcggctccgccgcgcaggacggttcgctcatcgtgcagggcggcggtacgctgaatgcg
ggtgtatttgagctcttcggatataatggcttcagcggtaccgcaaccatccgtggcgcc
gggtccgggatatccacttcgtcgagcctctttgtcggcgcctacacgggcgtcggccat
atcttcatcgaggacggcggaacgctgaccaccccctattctacatatatgagccagtat
aacggctcgctcggtaccgtaacggtgactggttcaggttcgacctggaacagtaactat
gagatcaatctcggcggtgccgaaggcaattacgacgcgacgggtatcctgacgatcgcg
gatgacggcctggtcaacataaacaatggcaacaggaatctgaatgtcgccaaatcgacc
ggctccaccggcacgctgaatatcggcgcggcggaaggcgatgccgccgtcgcggcggga
tcgttgcaggcaaagagtgttgtgttcggggcgggcgacggtacgctcgtcttcaatcat
acggaaacggattacaccttcgctccgtccatctcgggcaatggcggcgtacatcagctc
gcgggcaccaccaacctctccggatcgaatagctggtcgggaagcactctggtcgaaggc
ggtattctgcgcgcgggcgcggcgggcgctctttccgccaacgccgcctacacggtcaat
ggcggtacgctcgatctcaacgatttcgacctcaccgcaaccgaactctcgggcacgggc
ggaacggtcgatctcgggaccgccgaactcgaagtcgaccaggacggcgactccgttttc
gatggcctcatcgcgggtgcgggcagtctggtgaagctcggttccggcatcctctcgctg
accggcgcgaacacctattccggcggcacaacgctcggcgagggtacgctccgcctcgaa
gacgacgatgccattggcaccggcgcactcaccgtcaccggcggcaccctcgactatgat
gacggcatcgacctgtcgaacgacatcgacttgcgggcgcaggcgaccctcaacgtcacc
accggctccgccacccagtccggcaatatcggcgagacgggcggcagcttcggtatcgtg
aagtccggcgcgggcatcctctcgctcaccggcgcgaacacctacacaggcaccaccact
gtttccggcggcacgctgcgtgccggcagtgccgacgctctcgtctccggcgcctacatc
ttgaacggcggtaccctcgacctcaatgacttcgatctttccgcctccggactttccggt
gcaagcggtaccgtcgatctcggcagcgccgaactcgaagtcgatcaggacagcgacggg
gtcttcggcggcatcatctcgggcgcgggaagcctcctgaagctcggctccggtatgctc
accctcacgggcgggagcacctatacgggcctcaccaccatacgtgaggggacgcttgct
ctcgacggcggctctgtggagtcgtccgacgacgtcatcatcggagatctggcccatacg
gtgggtgaagtcacggtgactggtgcgggagcctcgctcgacaccgacagcagtgtgctt
gtcggagagctcggtgagggaacactgaacgtcgaaaatggcggcgttgtgacggccgat
gttgtcattgccgggcatctttcgggttcggacggagcgatccgtgtcaccggaaccgga
tcgcaggtcaacagcaccagcttgcttcggattggcgatgagggcgtcgggcgcctgatc
gtgtctgaaggtggcgccgtgacgaatacaagcacaggctatatcggcgcaggcacgaat
ggtgagggcgccatgactgtcaccggcacaggatcgaaactcgacaattccggcatcctc
tatgttggcggcgagtacaatggcgcgattggtgtcctgaccgttgccggcgaagccgct
gtcaatgtaggggccggcagcggcacagtccgtgtcgcgcatcattccggcgccaccggc
accctcaatatcggtgcggcggaaggcgatgccgccgtcgcggccggcacactgaatgcc
gccagcctgcaatttggtgcgggtaccggtcagattgtcttcaatcatctcgacgatgac
catgccttctccagcgatgtttccggcgccggcgaagtgcttcatctttccggcaccacc
atcctgaccggcgagaacacctataccggcggcaccaccgtttcgggcggcacgctccgc
gcgggccgcgtcggcgcattcacctccggcggctacgaagtgaatggtggcacgctcgac
ctcaacgatttcgacctttccatgtccgagctctccggcatcggcggtgccgtcgatctc
ggcagcgcggcgctcgcggtcggcagcggcaacacggacgcgaattttgcgggcgtgatc
tcaggtatcggcagcctcgaaaagacgggcctgggttccttcaccctcgccggcgcgaac
agctacactggcggcacgacggtttcgggcggcacgctgcgcgcgggcgccgcgtcggcc
ttcgtcgacggcagcgcctatacggtcgatggcggcacgctcgacctcaacgatttcgat
ctttccatgtccgagttgtcgggcaccggcggcacgatcgatctcggcggcgcgacgctt
accgtcggcagcggcaacacgttcacgaacttcgcgggcgcgatcgaaggaacgggcggt
ctcgaaaagacgggaacgggagaactgacgctgaccggcgcgaacagctacaccggcggc
acgacgatttccggtggtacgctcgaaggcagcacgtcgagcctcgtcggcgatatcgtg
aacaatgccacgctcgccttcacgcaggcattcgacggcacgttcggcggcgtcatatct
ggcacgggcagtctcgtgaagtccggttccggcgttctgaccctgaccggcgcgaatagc
tggtcaggcggtacgacgatccggcacggcacgctcgaaggcagcacgtcgagcctcacc
ggcgacatcgtcaacgacgcggcgcttgtcttcgcgcaggcgggcgacggcacctatgcg
ggcgcggtctcgggcaccggcagcctcgagaagaccggcgcgggcacgctcacgctcacc
ggcgcgaacggctacaccggcggcaccacggtttccggcggtacgctcgcgggcaacacg
tcgagccttcagggtgacatcgtcaacaatgcgagcctcctcttcgaccagtcggcggac
ggcacctatgcgggcgtcctgtccggcaacggcgacatcgtgaagtccggcgcggggagc
ctcgtcctctccggcatcagcggcgccttcacgggcggcctggaggtgctgtcgggcagc
ctcgtcgtcgacggcaccttcgggggcggccttctcgtctcgggcggcttcctcggcggt
tcgggcacggtcggcagcaccacgctcggcggcggcgcgacgctcgcggcgggcaattcg
atcggcacgctcaccgtcgcgggcgatctcgccttctctgccggttctgtcctcgcggtc
gaggtgaatgacggcggcgacgccgcgggcgtcaatgccgatttcgtccatgtgacgggc
gcggcgacgatcgcgagcggcgcggtcgtcgaggtcgcgccggcgaacggcacggatgac
ggcatcacctatgcgccctccaccacctaccggatcctcaccgccgatggcggcatcagc
ggcgtcttcgacggcgtcacggcgggcttcgccttcctcatgccggaagtctcctacgac
gccaccaacgtcttcctcatcctcacgcagatggcggccttcgaggatgtggcgtcgacg
ccgaaccagcagggcgtcgcggccgcggccgaggcgctcggcgccggtaaccccctctat
gacgagatcatcggcatgtcggaggaagaggcgcaagcggccttcgacgcgctctcgggc
gaggcgcatgcaagctcgaccggcgtcttttccagctccgccgggatcgtccggcggacg
atcttctcccgtctcttctcgcgcttcggcgcgccgcgcggcttcgcggcggcggaaggc
tatgtgccggcggcgggcgacgagacgccgcatggctatacggtatggggagaactcgtc
cgcggctggggcgagacggacgggtcggtgtcggcggcgggcatcgagcgcaattcgacc
ggcttcctcggcggcgttgatcgcgagatcggcgaggcaagccgcatcggtatcgcgctc
ggctacagccatgccacctttgacgtctcggggcgcgcctcctcgggcgaaagcgacaac
ttccatgtcgcgggctatgcgggaaccgaactcggtcccatggacctgaagggcgtcctc
ggttacagctaccagatggccgaaagccgccgccgtgtcgtcgtcggcggcgtcatcgac
gatctctcggcggactacggcgcccacaccttccaggcatcgggtgaggcttccgtcgat
ctcgcagcgggtcccgtcaccctgacgcctttcgcgggcctcgccgtcgttcatgtcgag
acggaagccttcaccgagacgggcgggccgtcggcgctttccatcgcctcctccagcaac
accaccggcatctctgagctcggtctgcgcgccgcgcgcgaggcgggctccctcaccctt
ttcggctcagcctcctggcgtcacgttttcggcgatgtcgagcccctttcccgcgcctct
ttcgcaagctcgcccgctaccaccttttcggttcgcggcacacccctctccgaggacgtc
gcctccatcggcggcggggtcgaacttctcatcgccgaggaaacgacgctcgagttttcc
tatcgcggtgaattcgcctccgacagccgcgaccatgggctgaaggcgaaagtttccatc
cgcttttga
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integrated database retrieval system
