Parvibaculum lavamentivorans: Plav_2436
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Entry
Plav_2436 CDS
T00580
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pla
Parvibaculum lavamentivorans
Pathway
pla03420
Nucleotide excision repair
pla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Plav_2436
03430 Mismatch repair
Plav_2436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pla03400
]
Plav_2436
Enzymes [BR:
pla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Plav_2436
DNA repair and recombination proteins [BR:
pla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Plav_2436
MMR (mismatch excision repair)
Other MMR factors
Plav_2436
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF3553
AAA_25
Ice1_2nd
Motif
Other DBs
NCBI-ProteinID:
ABS64045
UniProt:
A7HVW2
LinkDB
All DBs
Position
complement(2635293..2637629)
Genome browser
AA seq
778 aa
AA seq
DB search
MTSDPFDLGNIPEETTARSTSQQAMAGMRAPYLEGLNAEQREAVEALDGPVLVLAGAGTG
KTRVLTTRLAHLLATRKAWPGQILAVTFTNKAAREMRDRIGALIGGVVEGMQWLGTFHAL
GAKILRRHAELAGLRSDFTILDADDQMRLMKQIIVAEGIDEKRWPARQLASHIDGWKNRG
LTPDKVPAGEAHAFANGKGGELYAAYQARLKVLNAADFGDLLLEVLRIFQEHPEVLADYQ
DRFKYMLVDEYQDTNVAQYLWLRLLAQKHKNICCVGDDDQSIYGWRGAEVDNILRFEKDF
SGAKVVRLERNYRSTANILGAASGLIAANEQRLGKTLWTEANDNEGDPIKIASYWDGEEE
ARAIAEEVEQLQRNAHLLRDMAILVRASFQMREFEDRFINLGIPYRVVGGPRFYERAEIR
DANAYLRLVAQPDDDLAFERIVNKPRRGLGDVAVQTIHRLARAENTTLFRASKMLAASEE
LKPAARRALASFIEQVDRWRALVPGMPHTELAEIILDESGYTEMWQNDKSADAPGKLENL
KELVRSMEFHETLAGYLEHISLVMEMEQSDTADKINLMTLHSAKGLEFETVFLPGWEEGL
FPHQRALDESGLAGLEEERRLAYVGITRAKQRAYISFAANRRIHALWQSSIPSRFVDELP
KHHVQVTESAMAGASYQNYGQSRFAQDFAQNSNYSSPGWRRAQANTEMTARTRPPAYEVH
ADLVATSDPAAESYGKGERVFHQKFGYGHVTEIDGNKLTVDFDKAGRKKVIDSFLERA
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgaccccttcgatctcgggaacatccccgaggaaacgactgcccgctccaca
agccagcaggccatggcgggcatgcgcgcgccctatctggaaggcttgaacgcggagcag
cgcgaggctgtggaggcgctggacggccctgtgctggtgctggcgggcgcgggcaccggc
aagacgcgcgtgctgacgacgcggctggcgcatctgctggcgacgcggaaggcctggccg
gggcagatattggcggtgactttcaccaacaaggcggcgcgcgaaatgcgcgaccggatc
ggcgcgctgatcggcggcgtggtggaaggcatgcaatggctcggcaccttccatgcgctg
ggcgcgaagatattgcggcggcatgcggaactggcggggctgcgctccgacttcacgata
ttggatgccgacgaccagatgcggctgatgaagcagatcatcgtggccgaaggcatcgac
gagaagcgctggccggcgcgccagctcgcctcgcatatcgacggctggaagaaccgcggg
ctgacgccggacaaggtgcccgccggcgaagcgcatgccttcgccaacggcaagggcggc
gaactctatgccgcctatcaggcgcggctgaaagttttgaacgcggcggatttcggcgac
ctgctgctggaagtgctgcgcatcttccaggagcacccggaagtgctggccgactatcag
gaccgcttcaaatacatgctggtggacgagtatcaggacacgaacgtcgcgcaatatctg
tggctgcggctgctggcgcagaagcacaagaatatctgctgcgtcggcgacgacgaccag
tcgatctatggctggcgcggcgcggaggtggacaacattctccgcttcgaaaaggacttc
tccggcgccaaggtggtgcgcctcgaacgcaactaccgttccaccgcgaatattttgggc
gcggcctcgggcctgatcgccgcgaacgagcagcggctcggcaagacgctgtggaccgaa
gccaacgacaatgaaggcgacccgatcaagatcgcctcctattgggatggcgaggaggaa
gcgcgcgccattgccgaggaggtggagcagctgcagcgcaacgcccatctgctgcgggac
atggcgatactcgtccgcgcctcgttccagatgcgcgaattcgaagaccgcttcatcaat
ctcggcatcccctaccgcgtcgtcggcggcccgcgcttctatgagcgcgccgaaatccgc
gatgccaacgcctatctgcgccttgtcgcgcagccggatgacgaccttgcctttgagcgg
atcgtgaacaagccacggcgcgggctcggcgatgttgccgtgcagacgatccaccggctg
gcgcgcgcggagaacacgacgcttttccgcgcctcgaaaatgctggccgcgagcgaagaa
ctgaagcccgcggcgcggcgggcgctggcctccttcatcgagcaggtggaccgctggcgc
gcgctggtgcccggcatgccgcacacggaactggcggaaatcatcctcgatgaatccggc
tataccgagatgtggcagaacgacaaatcggcggacgcacccggcaagctcgaaaacctg
aaggaactcgtgcgctccatggagtttcacgagacgctggccggctatctcgaacacatc
tcgctggtgatggagatggaacagagcgacaccgccgacaagatcaacctgatgacgctg
cacagcgccaaggggctcgaattcgagaccgtgtttctgcccggctgggaagagggattg
tttccgcatcagcgcgcgctggacgaaagcggccttgccgggctcgaagaggaacgccgc
ctcgcctatgtcggcatcacgcgggcgaaacagcgcgcctatatttcttttgccgccaac
cggcgcatccatgcgctgtggcaaagctccatcccgtcgcgcttcgtggacgaactgccg
aaacatcatgtgcaggtgacggaaagcgcgatggcgggcgcgagctaccagaattacggc
cagagccgcttcgcgcaggacttcgcgcagaacagcaattattcgagccccggctggcgc
cgcgcccaggcgaataccgaaatgaccgcgcggacgaggccgcccgcctatgaggtccat
gccgatctcgtcgcgacaagcgaccccgccgccgaaagctacggcaagggcgaacgcgtc
ttccaccagaaattcggctatggccatgtgacggaaatcgacggcaacaagctgacggtc
gatttcgacaaggcggggcggaagaaggtgatcgacagttttctggagcgggcgtga
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integrated database retrieval system
