Parvibaculum lavamentivorans: Plav_2903
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Entry
Plav_2903 CDS
T00580
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pla
Parvibaculum lavamentivorans
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pla01002
]
Plav_2903
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pla01011
]
Plav_2903
Peptidases and inhibitors [BR:
pla01002
]
Cysteine peptidases
Family C82
Plav_2903
Peptidoglycan biosynthesis and degradation proteins [BR:
pla01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Plav_2903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
ABS64510
UniProt:
A7HX77
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Position
3104534..3105733
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AA seq
399 aa
AA seq
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MAEIARNYGQDQTHWVDPWQAETGAAVAEAPPFERSSAPVLSAETLLPLTHAIETYRVIA
NLGGWGYVASGERLELGVRDPRVVQVRERLTATGDLTVPAQDAELYDANVYEAVRRYQVR
NGLEPDGIVGRRTIAAMNVRVQTRIRQLELNLRRLSAAVPALPDRYVFVNIAGQEVEAVN
NGIVEFREPVIVGKQDRQTPEITSEVNSITFNPYWYVPKSIAMADMLPKIRANPDYLQRQ
GIRVLQGWDTNIRELNPRNIDWSNPRINEAYYFRQDPGPGNSLGSLKINFPNNQAIFLHD
TPTKTLFGRQERNFSSGCVRVQNVRGLVSWLMQGDSSEWDAARVARSVDSRQYRNVSLAT
PVPIYLMYLTAWVTPEGIVNFRDDVYDRDGSVNTSALEN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatcgcgaggaattacgggcaggaccagacccattgggtggacccctggcag
gcggagacgggcgcggctgttgcggaagcgccgcccttcgagcggtcgtcagcgccggtt
ctcagcgccgagacgctgttgccgcttacgcacgcaatcgagacttatcgcgtaatcgcc
aatctcggcggctggggctatgtggcctccggcgaacggctggagctcggtgtgcgcgac
ccgcgcgtcgtgcaggtgcgcgaacggttgacggcgaccggcgacctgaccgttccggcg
caggacgccgagctttatgacgccaatgtttatgaagcggtgcgccggtatcaggtgcgc
aacgggcttgagcccgatggtatcgtcgggaggcgcaccattgcggcgatgaatgttcgc
gttcagacgcgtattcggcaactggaactcaatctacgccggctttcggcggcggttccc
gcgctgcccgaccggtacgtgtttgtgaatattgcggggcaggaagttgaagcggtgaac
aacgggattgtggagttccgcgagcccgtcatcgtcggcaagcaggaccggcaaacgccg
gaaatcaccagtgaagtaaactcgatcacgttcaatccttactggtatgtcccgaaatcc
atcgcgatggccgatatgctgccgaagatccgggccaatcccgactatctgcaacggcag
ggcattcgcgtgctgcagggatgggacacaaatatccgtgaattgaacccgcgcaatatc
gactggtcgaacccgcgcatcaatgaagcttattacttcaggcaggaccccgggccgggc
aattcgctcggttctctcaagatcaattttcccaacaaccaggcgatctttcttcatgac
acgccgaccaagaccctgttcggaaggcaggaacgcaacttcagttcgggttgcgtccgt
gtgcagaatgttcgcgggcttgtgagctggctgatgcagggagatagctccgaatgggat
gcggcacgggtagcgcgatcggtggattcccggcagtacagaaatgtgtcgctggcgacg
ccggtgccgatttacctcatgtatctgaccgcgtgggtgacgccggaggggatcgttaac
ttccgggatgacgtgtatgatcgcgatggcagcgtgaatacgagcgcgctggaaaactaa
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