Parvibaculum lavamentivorans: Plav_3049
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Entry
Plav_3049 CDS
T00580
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pla
Parvibaculum lavamentivorans
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pla03032
]
Plav_3049
03400 DNA repair and recombination proteins [BR:
pla03400
]
Plav_3049
Enzymes [BR:
pla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Plav_3049
DNA replication proteins [BR:
pla03032
]
Prokaryotic type
DNA Topoisomerases
Plav_3049
DNA repair and recombination proteins [BR:
pla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Plav_3049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPR_10
Motif
Other DBs
NCBI-ProteinID:
ABS64656
UniProt:
A7HXM3
LinkDB
All DBs
Position
3253018..3255915
Genome browser
AA seq
965 aa
AA seq
DB search
MREPLSQAFATAPSTSEKHLSDTQDSDIPGDEPGPGDDTGMDSLNGSGTPPGGPGGPSAG
GPPPERDVAPIAIEDEMRSSYLDYAMSVIVSRALPDARDGLKPVHRRILFSMNENGYDWN
KPYRKSARVVGDVIGKYHPHGDQSIYDALVRMAQDFSMRLPLLDGQGNFGSVDGDPPAAM
RYTEVRMAKTAHALLNDIDKNTIDFKDNYDGTEREPVVLPAELPNLLVNGANGIAVGMAT
NIPPHNLGEVIDACIALIDNPDITIDELIEHVPAPDFPTGGIMLGRQGARLAYHTGKGSV
VVRGRVEFEEVRKDRQAIIISEIPYQVNKASMVEKIADLVREKRIEGIADLRDESDRNGM
RVVVELRRDAVPDVVLNQLYRFSPLQQSFGCNMLALDHGRPELMNLKQFLEIFVAFREEV
ISRRTKFELNKARDRAHVLVGLAIAVANIDEVIKLIRTAPDPASARESLMARDWPARDIA
PLIALIDDPRHQLREDGTIRMSEEQARAILELRLQRLTALGRDEIGDELKGLGERIEDYL
SILRSRARVLDIMRTELTAIKAEFATPRRTEIAESESDFEDEDLIQREDMVVTVSHQGYI
KRVPLSTYRAQRRGGKGRSGMSTKDEDFVTRLFVANTHTPMLFFSSTGMVYKLKVWRLPQ
STPQARGKAMINILPLDHGEYITTVMPMPEDEASWDSLHVMFATRKGSVRRNKLSDFVQI
NRNGKIAMKFEGDDADDAIVGVQICTEEDDVLLTAANGRCVRFPVTEVRVFSSRKSTGVR
GIRLGDDDKLIAMSIMRHVDVTPAEARAYLKQAAAMRRAVSGEGEEPEAEIVEAEEGEEE
AAEEMTLSTERYSELGAREQFVLTVSEKGFGKRSSSYDYRTSGRGGKGIIAMAVTPRNGN
LVASFPVDVQDQIMLVTDAGQLIRCPVDDVRAAGRATQGVTIFRTAPDERVVSVERVEET
GSDEE
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgagccgctttcacaggccttcgcgacagcgccctcaacgtcagaaaaacacttg
tccgatacgcaagacagcgacattccgggtgacgagccaggcccgggcgacgataccggc
atggatagtttgaacggttcgggcacgccgcccggcggtccgggcggtccttccgccggc
ggtccgccgcccgagcgcgacgtcgctcccatcgccatcgaagatgaaatgcgcagttcc
tatctcgattacgcgatgagcgtgatcgtgagccgcgcgctgcccgatgcgcgggacgga
ttgaagcccgtgcaccgccgcatcctcttttcgatgaacgaaaacggctacgactggaac
aagccctatcgcaagtcggcccgcgtcgtcggtgacgtgatcggtaaataccatccgcat
ggcgaccagtcgatttacgacgcgctggtgcgcatggcgcaggatttctccatgcgcctg
ccgctcttggatgggcagggcaatttcggttcggtggacggcgacccgcccgccgccatg
cgatacaccgaagtgcgcatggcgaagacggcccatgcgctgctcaacgacatcgacaag
aacacgatcgacttcaaggacaattacgacggcaccgaaagggagcccgtcgttctcccc
gccgaattgccgaaccttctcgtcaatggcgcgaacggtatcgccgtcggcatggcgacc
aacatcccgccgcataatctcggcgaggtgatcgacgcctgtatcgcgctgatcgacaat
cctgacatcacgatagatgaattgatcgagcatgttcccgcgcccgattttccgaccggc
ggcatcatgctcggccggcagggcgcgcgtcttgcctatcacacgggcaagggctcggtc
gtggtgcgcggccgcgtcgagttcgaggaagtgcgaaaagaccgtcaggcgatcatcatt
tccgaaattccctatcaggtgaacaaggcctcgatggtggaaaagatcgccgacctcgtg
cgcgagaagcgcatcgaaggcatcgccgatctgcgcgacgagtccgaccgcaacggtatg
cgcgtggtggtggagcttcgccgcgatgccgtgccggatgtggtgctgaaccagctctac
cggttctcgccgttgcagcagagcttcggctgcaacatgctcgcgctcgatcacgggcgt
cccgagctgatgaacctgaagcagttcctcgaaatcttcgtcgctttccgcgaggaagtg
atttcacggcgaaccaagttcgagctcaacaaggcgcgcgaccgcgcccatgtccttgtc
ggcctcgccattgccgtcgccaatatcgatgaggtcatcaagctcatccgcaccgcgcca
gacccggcatcggcccgcgaaagtctgatggcgcgcgactggccggcgcgggacattgcg
ccgctgatcgcgctgatcgacgatccgcgccaccagttgcgtgaagacggcaccatccgc
atgtcggaggagcaggcccgcgccattctcgaactccgcctgcagcgcctcaccgcgctt
ggccgcgatgaaatcggcgacgaactgaagggtctgggcgagcggatcgaggattatctc
tcgatcctgcgttcgcgtgcccgcgtgctcgacatcatgcgtaccgagctgacggcgatc
aaagccgagttcgcgacgccgcgccgcaccgagattgccgagtccgaatccgatttcgag
gatgaagacctgatccagcgtgaggacatggtcgtcacggtcagccatcagggctatatc
aagcgcgtgccgctctcgacctatcgcgcgcagcgccgcggtggcaagggccggtccggc
atgtcgaccaaggacgaggatttcgtcacccgtctctttgtcgccaatacgcatacgccc
atgctcttcttctcgtccacgggcatggtctacaagctcaaggtctggcgtctgccgcaa
tcgacgccgcaagcgcgcggcaaggcgatgatcaatatcctgccgctcgaccacggcgaa
tacatcaccaccgtcatgccgatgccggaagacgaagcgagctgggacagcctccacgtt
atgttcgccacccgcaagggcagcgttcgccgcaacaagctgtcggacttcgtgcagatc
aaccgcaacggcaagatcgcgatgaagttcgaaggcgacgatgcggatgacgccattgtc
ggcgtgcagatctgcacggaggaagacgacgtgctgctcaccgccgcgaatggccgctgc
gtccgcttccccgttaccgaggttcgcgtcttctccagccgcaaatcaactggcgtgcgc
ggcatccgtctcggcgatgacgacaagctgatcgccatgagcatcatgcgtcatgtcgac
gtcacgccggcggaggcgcgcgcttacctgaagcaggccgccgccatgcgccgtgccgtt
tccggcgagggcgaggagccggaagccgaaatcgtcgaggcggaagagggcgaagaggaa
gcagccgaagagatgacgctctcgaccgagcgttattccgagcttggcgcccgcgagcag
tttgtgctcaccgtcagcgaaaagggcttcggcaagcggtcctcctcctacgactaccgg
acgtcgggccgcggcggcaagggcatcatcgccatggccgtcacgccgcgtaacggcaat
ctcgttgcctccttcccggtcgatgtgcaggaccagatcatgctcgtcacagatgccggc
cagctcattcgctgcccggtggacgatgtacgcgccgcgggacgcgcgacgcaaggcgtc
acgattttccgtaccgcgccggatgagcgcgtcgtctcggtcgagcgggtcgaggaaacc
ggctcggacgaggaatag
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