Parvibaculum lavamentivorans: Plav_3112
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Entry
Plav_3112 CDS
T00580
Name
(GenBank) ATPase involved in DNA replication
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pla
Parvibaculum lavamentivorans
Pathway
pla03030
DNA replication
pla03430
Mismatch repair
pla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Plav_3112
03430 Mismatch repair
Plav_3112
03440 Homologous recombination
Plav_3112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pla03032
]
Plav_3112
03400 DNA repair and recombination proteins [BR:
pla03400
]
Plav_3112
Enzymes [BR:
pla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Plav_3112
DNA replication proteins [BR:
pla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Plav_3112
DNA repair and recombination proteins [BR:
pla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Plav_3112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
Mg_chelatase
AAA_22
AAA_24
AAA_5
nSTAND3
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ABS64719
UniProt:
A7HXT6
LinkDB
All DBs
Position
3322629..3323792
Genome browser
AA seq
387 aa
AA seq
DB search
MSDTEIPESDRLGDFPHPREAAALVGQEAAERALFEAFMSGRMHHAWLLTGPKGIGKATL
AYRMARFALHYGTAEAARAAGARDLNISPDEGVFHQVAAGSHPNLLTVRRPWDDKTKKLK
TVIPVDEVRRIGHFFGLTATERGAWRVVIIDSADEMNANSANALLKALEEPPPNGLFLVL
SHQPGQLLPTIRSRCRTLRMTPLAEGDIVSMMEPAERQAEARAKEAKRKFAMTPAAERQP
IAQLAEGSAGRALSIAAGGGLGLYKELAGLLAGLPRLDIAAVHAFADKAGRKGADDAYET
MIELLTHWLQRLVRTGAGLHPGPDIVAGEGAAMARLAAGGSLDRWVEVWEKINQSTARGE
ALNTDRKLVILNVFSMLEAAASERAGA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccgagattcccgaaagcgaccggcttggcgacttcccgcatccgcgcgag
gcggcggcgcttgtcgggcaggaggcggcggagcgcgccctttttgaagccttcatgagc
ggcaggatgcaccatgcctggctgcttacagggcctaagggtatcggcaaggcgacgctc
gcctatcggatggcgcgatttgcgctgcattacggaacggcggaggccgcaagggcggca
ggagcacgggatctgaacatcagcccggatgagggggtgttccatcaggtagctgcgggg
agccacccgaacctgcttaccgtacgccgcccgtgggacgacaagacgaagaagctgaag
accgttattcccgtggatgaggtgcgccggatcggacatttcttcgggctgacggcgacg
gagcgcggggcctggcgcgtcgtcatcatcgacagcgccgacgagatgaacgccaattcg
gccaatgcgcttttgaaggcgctggaggagccgccgccgaacgggcttttcctcgtgctg
agccatcagccgggtcagcttctgccgacgatccgctcacgctgccggacgctgcggatg
acgccgctggcggagggcgacatcgtgagcatgatggaacccgccgagcggcaggcggaa
gcgcgagcgaaggaagcgaagcggaaattcgccatgacgccggcggcggagcggcaaccg
atcgcccaactggccgaaggcagcgcggggagggcgctttccattgcggcaggcggcggg
ctcgggctctacaaggaactggcgggcctgcttgccgggctgccgcgcctcgacattgcg
gcggttcacgcctttgccgacaaggcgggccgcaagggggcggacgatgcctatgagacc
atgatcgagctgctgacgcactggctgcagcggctggtgcggacgggcgcggggcttcat
cccggccccgacatcgtggccggcgagggcgcggcgatggcgcggcttgccgccgggggc
agccttgatcgctgggtcgaggtatgggaaaagatcaatcaatcaacggcccgcggcgag
gcgctgaacacggatcgcaagctcgtgatcctgaacgtgttttcgatgctcgaagcagcc
gcgagcgagcgcgccggcgcgtga
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