Parvibaculum lavamentivorans: Plav_3124
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Entry
Plav_3124 CDS
T00580
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pla
Parvibaculum lavamentivorans
Pathway
pla02024
Quorum sensing
pla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Plav_3124
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Plav_3124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pla03019
]
Plav_3124
03036 Chromosome and associated proteins [BR:
pla03036
]
Plav_3124
Messenger RNA biogenesis [BR:
pla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Plav_3124
Chromosome and associated proteins [BR:
pla03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Plav_3124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
AcMNPV_AC11
Motif
Other DBs
NCBI-ProteinID:
ABS64731
UniProt:
A7HXU8
LinkDB
All DBs
Position
complement(3335130..3335378)
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AA seq
82 aa
AA seq
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MNEKTHNLQDTFLNHVRKNKTTLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKHA
ISTIMPAQPVQLFEPEANGEEG
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaagacccataacctgcaggatacgttcctgaaccacgttcgcaagaacaag
acgaccctcaccatctttctggtaaatggcgtcaagcttcagggcgtggtcacctggttc
gacaacttttgtgtgttgctgcgccgggacggccattcgcagctcgtgtataagcacgcg
atatcgaccattatgccggcccagcccgttcagcttttcgagcctgaagccaacggggag
gagggctga
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