KEGG   Parvibaculum lavamentivorans: Plav_3250
Entry
Plav_3250         CDS       T00580                                 
Name
(GenBank) DNA topoisomerase IV, B subunit
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pla  Parvibaculum lavamentivorans
Brite
KEGG Orthology (KO) [BR:pla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pla03032]
    Plav_3250
   03036 Chromosome and associated proteins [BR:pla03036]
    Plav_3250
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pla02048]
    Plav_3250
Enzymes [BR:pla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Plav_3250
DNA replication proteins [BR:pla03032]
 Prokaryotic type
  DNA Topoisomerases
   Plav_3250
Chromosome and associated proteins [BR:pla03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Plav_3250
Prokaryotic defense system [BR:pla02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Plav_3250
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_2 HATPase_c_3
Other DBs
NCBI-ProteinID: ABS64855
UniProt: A7HY72
LinkDB
Position
3470183..3472222
AA seq 679 aa
MAARKTSKSDDTDDLFAAAPKAAKPARAPKGAPRDDGTYSAKDIEVLEGLEPVRRRPGMY
IGGTDEKALHHLFAEVLDNSMDEAVAGHANWIEVTVSEDGSLTVADNGRGIPVDPHPKFK
NKSALEVILTTLHSGGKFGGKAYETSGGLHGVGVSVVNALSDRFEVEVARDQTLYTQSYA
RGVPTTKLTDKGRTQNRRGTKITFHPDADIFGKGAHFIPKRLYKMARSKAYLFGGVEIRW
NCAPSLIGEKDDTPVNDVLHFPGGLVDYLKASINGYDTVTAEPFTGKVSRAGSHGSVEWA
IAWFGGGDGFLNSYCNTVPTAEGGTHEAGLRAALTKGLKAYADMVGNKKAAQIQAEDVLG
TAGAMLSVFIREPEFQGQTKEKLASAEAQRLVERAIGDHFDHWLTAAPQQANKLLDWVID
RADDRLRRRQEKDVARKSATRKLRLPGKLADCSQSAADGSEIFLVEGDSAGGSAKQARDR
ASQAILPLRGKILNVASASGAKLAQSQQISDLIQALGVRTGSHYRQADLRYDKVIIMTDA
DVDGAHIASLLITFFYRELPELIREGHLYMAVPPLYKLTQGGKTLYARDDAHKDELLKAE
FSGRGKVEISRFKGLGEMMPAQLKETTMARGKRTLMRVVVPEAEAKETSGAIERLMGNKP
ELRFQFIQEHAAFAHDLDI
NT seq 2040 nt   +upstreamnt  +downstreamnt
atggccgcccgcaagacgagcaaatccgacgatacagacgacctttttgccgccgctccg
aaggcggcaaaacctgcgagagctccgaaaggggcgccgcgggacgatggcacctattcc
gcgaaggatatcgaggttctggaggggcttgagcccgtgcggcggcggccgggcatgtat
atcggcggcaccgacgagaaggcattgcatcaccttttcgcggaagtgctcgacaactcc
atggacgaggccgttgccggccatgccaactggattgaagtcacggtgtcggaggatgga
agcctgaccgtcgcggataacggtcgcggtattcccgtggacccgcatccgaagttcaag
aacaagtcggcgctggaagtcattctcacgacactccactccggcgggaagttcggcggc
aaggcctatgagacatcgggcggcctgcacggcgtcggtgtatcggtggtgaacgcgctg
tcggaccgtttcgaggtcgaggtcgcacgcgaccagacactttacacgcagagctacgct
cgcggcgtaccaacaaccaagctcacggacaaggggcgcactcagaaccgccgcggaacg
aaaattacgttccatccggatgccgacatcttcggcaaaggcgcgcatttcattcccaag
cgtctctacaagatggcacgttccaaagcctatcttttcggcggcgtcgaaatccgctgg
aactgcgcgccatcgctcatcggcgagaaggacgatacgccggtaaatgatgtgctgcat
ttcccgggcggtctcgtcgattacctcaaggcatcgatcaacggctacgacacggtaacg
gcggaaccctttaccggaaaagtctcgcgggcgggaagccatggctcggtggaatgggca
atcgcctggtttggcggcggtgacggatttctcaactcctattgcaacaccgtgcccacg
gctgagggcggtacacacgaagcgggactgcgcgcggcactgaccaaaggcctgaaggcc
tatgcagatatggtgggcaacaagaaggcggcacagatacaagccgaagatgttctcggg
acagccggcgccatgctttcagtgttcattcgcgaacccgaattccaggggcagacgaag
gaaaaactggcgagcgcggaagcgcagcgtttggtcgagcgggccatcggcgaccatttc
gaccattggcttacagccgcacctcaacaggcaaacaagctgctcgactgggtgatcgat
cgcgccgacgaccggcttcgccggcggcaagagaaggacgtggcacgcaagagcgcaacg
cggaaactgcgcctgccgggcaagcttgccgattgcagtcagtcggctgctgacggatcg
gagatatttctcgtcgaaggtgacagcgccggcggctcggcaaagcaggcgcgcgaccgc
gcaagccaggcgatcctgcctctacggggcaagatattgaacgtggcaagcgcaagcgga
gcgaaactcgcgcagagccagcagatttccgacctcattcaggcgctaggcgtccgcacg
ggatcgcattaccggcaggccgacctccgctatgacaaggtcatcatcatgaccgacgcc
gacgtggacggagcacacatagcctcgcttcttattacattcttctatcgcgagcttccg
gagcttattcgagagggacatctctatatggcggtgccgccgctctacaagctgacgcaa
ggcggcaagaccctctatgctcgtgacgatgcgcacaaggacgaactgctcaaggcggag
ttttccggtcgcggcaaggttgagatcagccgcttcaaagggcttggcgaaatgatgccc
gctcagttgaaggagacgaccatggcgcgcggcaagcgaacgctgatgcgagtggttgtt
cccgaagctgaagcgaaagagacgagcggtgccatcgagcggttgatgggaaacaaaccg
gagctccgtttccagttcatccaagagcatgcggctttcgctcacgatctcgacatctag

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