KEGG   Parvibaculum lavamentivorans: Plav_3299
Entry
Plav_3299         CDS       T00580                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pla  Parvibaculum lavamentivorans
Pathway
pla00230  Purine metabolism
pla00240  Pyrimidine metabolism
pla01100  Metabolic pathways
pla01232  Nucleotide metabolism
Module
pla_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pla_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pla00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Plav_3299
   00240 Pyrimidine metabolism
    Plav_3299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pla03400]
    Plav_3299
Enzymes [BR:pla01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Plav_3299
DNA repair and recombination proteins [BR:pla03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Plav_3299
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N Abi_C
Other DBs
NCBI-ProteinID: ABS64904
UniProt: A7HYC1
LinkDB
Position
3528390..3532124
AA seq 1244 aa
MRIQRCFTVEGQSPYEGIAFRTTASEIRNPDGSVVFRLQDIQVPAEWSQVACDVLAQKYF
RKAGVAAVLKRVPEAGVPAFLWRQEPDHEALEALRPEDRFGPEMDARQVFDRLAGTWTYW
GWKGGYFDSEADAQAFFDEHRFMLAAQIAAPNSPQWFNTGLHWAYGIDGPAQGHWRTDPA
TGETARTATAYEYPQPHACFIQSVNDDLVNENGIMDLWVREARLFKYGSGTGSNFSDLRG
EDEKLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVIVDIDHPDVEDFINWKVKE
EQKVAALVTGSKINQKHLNAIMRACVNCEADGDACFDPKKNPALKREVLAARKAHVPENY
VQRVIQFAKQGYDEIDFRVYDTDWDSEAYLTVSGQNSNNTVRVTDDFLRAVEEDAEWSLK
SRLTGEATKTLPARELWEQVGHAAWASADPGIQYHTTINDWHTCPASGPIRASNPCSEYM
FLDDTACNLASINLMQFRDADGRFDVEAFEHAVKLLTIVLEISVLMAQFPSREIAERSFR
YRTLGLGFANIGGLLMSCGLAYDSAEARALAGAISAIMTGVSYATSAQMAKELGAFEGYA
ENSAHMLRVMRNHARAAHGYNGGYEDLSVYPLALDAANCPQADLVDHARASWDLAVSMGE
RYGYRNAQATVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPQALRT
LGYDAAAIERIVNYAVGFGTLANAPGVSHERLRELGFTQEKINIVEEALAGAFDIRFVFN
KWQLGEEFCTDVLGLDADAMDDLDFDLLAAIGFTKQEIDAANLHVCGAMTLEGAPGLKDE
HLPVFDCANPCGRIGKRYLSVESHIRMMAAAQPFISGAISKTINMANAATVEDCKESYML
SWKLGLKANALYRDGSKLSQPLNSQLLEDEADDEAEESAVETLMAQAPQERARVVAERSV
AQLVEQVKSAEQKREKLPDRRKGYTQKALVGGHKVYLRTGEYDDGKIGEIFIDMHKEGAA
FRSLMNNFAIAISLGLQYGVPLEEYVEAFTFTRFEPAGLVQGNDRIKNATSILDYVFREL
AVSYLGRSDLGHVDPKEFAFDAMGDGADEGKAPALPASAVVSPGYTRNAQMGNLYLVRGG
AAATARADTAEAVAAPAVREQTVKAEVMAAGALMRAGSSESFAAVAVGAVSSGGGSSGGG
ISRAAEARMKGYEGEACSECGNFTMVRNGTCLKCDTCGGTSGCS
NT seq 3735 nt   +upstreamnt  +downstreamnt
atgcgtatccagcgttgtttcaccgtcgagggtcagtcgccatatgaaggcatcgccttc
aggacgacggcgagcgaaatccgcaatcccgacggctccgtcgtgttccggctgcaggac
atccaggtgcccgccgaatggagccaggtggcctgcgacgtgctggcccagaaatatttc
cgcaaggcgggcgtcgccgccgtgctgaagcgcgtgcccgaggccggtgtcccggccttc
ctgtggcggcaggagccggatcatgaggcgctcgaggcgctgcggccggaagatcgtttc
ggccccgagatggacgcgaggcaggtcttcgaccggctggccggcacatggacctattgg
ggctggaagggcggctatttcgacagcgaggccgacgcgcaggcctttttcgacgagcac
cgtttcatgctggcggcgcagattgccgcgcccaactccccgcaatggttcaataccggc
cttcactgggcctatggcatcgacggcccggcccagggccattggcgcaccgaccccgcc
accggcgaaaccgcgcgcacggccacggcctacgaatatccgcagccccatgcctgcttc
atccagagcgtgaacgacgatctcgtgaacgagaacggcatcatggatctctgggtccgc
gaggcgcggctcttcaaatatggctccggcaccggctccaacttctcggatctgcgcggc
gaggacgaaaagctttcgggcggcggcaagtcgtcgggcctgatgagcttcctcaagatc
ggcgaccgggcggccggcgcgatcaaatccggcggcacgacgcgccgtgcggcgaaaatg
gtgatcgtcgatatcgaccacccggatgtcgaggacttcatcaactggaaggtgaaggaa
gaacagaaggtggcggcgctcgtcaccggctcgaagatcaaccagaaacacctcaacgcc
attatgcgcgcctgcgtgaattgcgaggcggatggcgacgcctgtttcgacccgaagaag
aaccccgccctcaaacgcgaagtgctggcggcgcgcaaggcgcatgtgccggaaaactat
gtgcagcgcgtgatccagttcgcaaagcagggctacgacgaaatcgacttccgggtctac
gacacggattgggactccgaggcctatctcaccgtctcgggccagaactcgaacaacacc
gttcgcgtcacggatgatttcctgcgcgcggtggaagaggatgcggagtggtcgctgaaa
agccgcctcaccggcgaggccacgaagaccctgcccgcccgcgaactctgggagcaggtc
ggccatgccgcatgggcgagcgccgatccgggcatccagtatcacaccaccatcaacgac
tggcatacctgccccgcttccgggccgatccgcgccagcaatccgtgctcggaatatatg
ttcctcgacgacacggcctgcaacctcgcctcgatcaacctgatgcagttccgcgacgcc
gatggccgtttcgatgtcgaggcgtttgagcatgccgtaaagcttctcaccatcgtgctg
gaaatttccgtcctgatggcgcagttcccgagccgggaaatcgcggagcggagtttccgc
taccgcacgctcggcctcggcttcgccaatatcggcggcctgctcatgtcctgcggcctt
gcctacgattcagccgaagcgcgcgcactcgcgggcgcgatcagcgccatcatgaccggc
gtttcctatgcgacctccgcccagatggcgaaggaactcggcgccttcgaaggctatgcg
gaaaattccgctcacatgctgcgggtgatgcgcaaccatgcgcgcgccgcgcatggctac
aatggcggctatgaagacctcagcgtctatccgctcgcgctcgacgcagcaaactgcccg
caagccgatctcgtcgatcacgcccgcgcctcctgggatctcgcggtctcgatgggcgaa
cgctacggctatcgcaatgcgcaggcgaccgtcatcgcgcccacaggcacgatcggcctt
gtcatggattgcgacacaaccggcatcgagcccgatttcgcgctggtgaaattcaagaag
ctcgcgggcggcggctatttcaagatcatcaaccgcgccgtgccgcaggcgctccgcacg
ctcggctatgacgctgccgccatcgagcggatcgtcaattatgccgtcggtttcggaacg
ctcgccaatgcgccgggcgtgagccatgaacgcttgcgggagctcggcttcacgcaggaa
aagatcaacatcgtcgaagaggcactcgccggtgctttcgacatccgcttcgtcttcaac
aagtggcagcttggcgaggaattctgcaccgatgtgctcggcctcgatgccgatgcaatg
gacgatctcgatttcgacctcctcgccgccatcggcttcaccaagcaggagatcgacgcc
gccaaccttcatgtctgcggtgcgatgacgcttgaaggcgcgccgggcctgaaggacgaa
caccttcccgtcttcgattgcgccaatccctgcggccgcatcggcaaacgctatctctcg
gtcgaaagccatatccgcatgatggcggcggcgcagcctttcatctcgggcgccatctcc
aagaccatcaacatggccaatgcggcaacggtcgaggattgcaaggaaagctacatgctg
tcctggaagctcggcctgaaggcgaatgcgctttaccgcgacggctcgaagctgtcacag
ccgctcaactcgcagcttctcgaagatgaagccgatgacgaagcggaagaaagtgccgtc
gaaacgctgatggcgcaggcgccgcaggaacgcgcccgcgtggtcgcggagcgcagcgtg
gcgcagcttgtcgaacaggtgaagtcggcggagcagaagcgcgagaagcttcccgaccgc
cgcaagggctatacgcagaaggcgctggtcggcggccacaaggtctatctccgcaccggc
gaatatgatgacggcaagatcggcgaaatcttcatcgacatgcacaaggagggcgccgcc
ttccgctcgctgatgaacaatttcgccatcgcgatttcgctcggcctccaatatggcgtg
ccgctggaggaatatgtcgaggccttcaccttcacgcgcttcgagccggcgggccttgtc
cagggcaatgaccggatcaagaatgcgacctcgatcctcgattatgtcttccgcgaactc
gccgtctcctatctcggccgctccgatctcggccatgtcgatccgaaggaattcgccttc
gacgccatgggcgacggtgccgacgaaggcaaggcacctgccctccccgcctccgccgtg
gtaagccccggctacacgcgcaatgcgcagatggggaacctttatctcgtgcgcggcggc
gcggcggctacggcccgcgccgacacggcggaagccgtcgccgcgcccgcggtccgcgag
cagacggtgaaagccgaagtcatggccgccggcgccttgatgcgcgccggctcgtccgaa
agcttcgcggcagttgccgtcggcgccgtatcgtcagggggcggatcatccggcggcggc
atcagccgcgccgccgaagcccgcatgaaaggctatgaaggcgaagcctgcagcgaatgc
ggcaacttcacgatggtcaggaacgggacgtgtttgaagtgcgatacgtgcggcgggacc
agcgggtgtagctga

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