Parvibaculum lavamentivorans: Plav_3440
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Entry
Plav_3440 CDS
T00580
Name
(GenBank) Integrase catalytic region
Organism
pla
Parvibaculum lavamentivorans
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Gene cluster
GFIT
Motif
Pfam:
HTH_21
rve
HTH_Tnp_1
HTH_28
rve_2
rve_3
HTH_23
HTH_22
Tektin
HTH_29
CENP-B_N
DUF4140
Motif
Other DBs
NCBI-ProteinID:
ABS65041
UniProt:
A7HYQ8
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Position
complement(3675607..3677208)
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AA seq
533 aa
AA seq
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MYSYEDRIRAVELYIKLGRRVRPTIRQLGYPTKNSLKGWYNEYQQKLDLPAGYAGRRPKF
SKEQKAAAIEHYLAHDRCIAATMRALGYPCRGTLTAWIREALPEARRRVVGSTVRRRYSG
ELMQAGVMELCTREESAQAVADKFGVCRPTLYNWKNQLLGREAPASMKRTNPSSPSQERD
ELERQVESLRREVRQLRLEQDLLNKANELLKKGLGVDLQLLSNREKTLLIDALREHYGLP
ELLAQLDLARSSYFYHRARAAVGDKYLKVRQSITDIFESNHRCYGYRRLQASLTRQDVTI
SEKVVQRLMKQESLVVPRPRKRRYASYLGEISPAPENLIDRDFQAAVPNAKWLTDITEFQ
IPAGKVYLSPIIDCFDGMVVSWTIGTSPDAELVNTMLDAAIETLADTADRPVVHSDRGGH
YRWPGWLSRMSNANFIRSMSRKACSPDNAACEGFFGRLKNELFYPRDWKTATIEQFVEAV
DSYIRWYNEKRIKIAPVFLSAVTAQAAASRRRWHCSRAIGVSMRSPTSIWSSQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtattcctacgaagatcgaattcgagcggttgagctctatatcaagctgggcaggcgc
gtcaggcccacgatccgccagctgggttatccaacaaagaattctctgaagggctggtac
aacgaataccagcagaagctcgacttgccagcgggctatgcgggccggagacccaagttc
tcgaaggaacagaaggcggcagctatcgagcattacctcgctcacgaccgctgcattgcg
gccaccatgagggcactgggctacccctgcagagggacgctaaccgcttggattcgcgag
gcccttcctgaagccagaaggcgtgtcgtcggcagtacggtgcgacgaaggtattccggg
gagctgatgcaagcaggagtcatggaactctgcactcgcgaggaaagtgcccaggctgta
gccgacaagttcggcgtgtgccggccaacgctgtacaactggaagaaccaacttctggga
cgtgaagcacccgcatccatgaaacgtaccaatccatcttcgccttcgcaggagcgcgat
gagctcgagcgccaggttgagtccctgcgccgcgaagtcaggcaactgcgcctcgagcag
gatcttttgaacaaggccaacgaactgttaaaaaaaggcctgggcgtcgacctgcagctc
ctgtccaaccgggagaagacactgctgattgacgccctcagggagcactatggcctgcca
gagctccttgcacagttggatcttgcgcgcagttcgtatttctatcaccgggcccgcgca
gcggtgggcgacaagtacctgaaggttcggcaatccatcaccgacatctttgagtcgaac
caccgctgctatggctaccgcaggctgcaggcatctctgaccaggcaggacgtcacgatc
tcagagaaggttgtacagcggttgatgaagcaggaaagcctggttgttccaaggcccaga
aagcgccgctatgcgtcttaccttggcgaaatcagcccagcgcctgagaacctcatcgat
cgcgacttccaggccgcggtgcccaacgcgaaatggctcacggacatcacggagttccag
atcccggctggcaaggtgtacctctcgcccatcatcgactgcttcgacggaatggtcgtc
agctggaccattgggaccagtccggacgcggagttggtcaacacgatgctggacgcagcc
atcgagacgttggccgacacggctgatcgtcccgtggtccactccgatcggggcggccac
taccgctggccgggttggctctcaagaatgagcaacgcgaacttcatccgctcgatgtct
cgcaaagcatgctcacctgataacgctgcctgcgaaggcttcttcggtcggctgaagaat
gagctgttctatcctcgggactggaagaccgccaccattgagcagttcgtcgaggcggtc
gactcgtacatccgctggtacaacgagaagcggatcaagatcgcacccgtattcttgtca
gcggtgacagcgcaggcggcggcctcgcggcggcgctggcattgctcgcgcgcgataggg
gtaagtatgcgatcgcctaccagcatctggtcttcccaatga
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