Parvibaculum lavamentivorans: Plav_3485
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Entry
Plav_3485 CDS
T00580
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pla
Parvibaculum lavamentivorans
Brite
KEGG Orthology (KO) [BR:
pla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pla03400
]
Plav_3485
DNA repair and recombination proteins [BR:
pla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Plav_3485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
AAA_16
Lon_C
DnaB_C
AAA_22
nSTAND3
RecA
NTPase_1
SLFN-g3_helicase
AAA_24
AAA_30
AAA
GvpD_P-loop
ATPase_2
DAP3
CobU
CbiA
AAA_5
NPHP3_N
AAA_14
NACHT
ABC_tran
Zeta_toxin
MCM
Fer4_NifH
AAA_29
IstB_IS21
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABS65084
UniProt:
A7HYV1
LinkDB
All DBs
Position
3730928..3732352
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AA seq
474 aa
AA seq
DB search
MARASRTFVCQACGAVTARWAGRCESCGEWNTIVEEAPDSAGVGGGPQKSLAGARAKGRK
IELVAMSGETADPPRHVTGVGEFDRVTGGGLVPGSALLIGGDPGIGKSTLLLQVMAALAR
KGKSVVYISGEEAIAQVRMRARRLGLADAEVQLGAETNLKDIIGTLESGQAPDAVVIDSI
QTMWTDVLESAPGTVAQVRASAQELVRFAKKRGSAVILVGHVTKEGQIAGPRVVEHMVDA
VIYFEGERGHQFRILRAVKNRFGPANEIGVFEMGEMGLAEVPNPSALFLGERDGETSGSA
VFAGIEGTRPVLVEIQALVAQSSLGTPRRAVVGWDGGRLSMILAVLEARCGLSLAGQDVY
LNVAGGLRINEPAADLAVAAALVSSVSGMPLPPDCVIFGEISLSGAVRPVNQMDARLKEA
EKLGFTRGIIPASAARTRPSTALKFTEISDLAGLIAHLTAGDGKGKGDRRARDV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcatcacgcacatttgtctgtcaggcttgcggggcggtgacggcccgctgg
gcggggcggtgcgagagttgcggcgagtggaacaccatcgtcgaggaggcgcccgacagc
gccggcgtcggcggcgggccgcagaaatcgctcgcaggcgcgcgggcgaaggggcggaag
atcgaactcgtcgcgatgagcggcgagacggccgacccgccgcgccatgtgaccggcgtc
ggcgaattcgaccgggtgacgggcggcgggctggtgccgggctcggcactgctgatcgga
ggcgatccgggcatcggcaagtcgacgctgcttttgcaggtgatggcggcgctggcgcgg
aaaggaaaatccgtcgtctatatttccggcgaagaggcaattgcgcaggtgaggatgcgg
gcgcgcaggctcgggcttgcggatgccgaagtgcagctcggcgcggagacgaacctcaag
gacatcatcggcacgctggaaagcggacaggcgccggacgcggtggtgatcgactccatc
cagacgatgtggacggatgtgctggaatccgcgcccggcacggtggcgcaggtgcgcgcc
tcggcgcaggagcttgtgcgctttgcaaagaagcgcgggtcggccgtcattctcgtcggc
catgtgaccaaggaaggccagatcgcggggccacgagtcgtcgagcacatggtcgatgcg
gtgatctatttcgaaggcgagcgcggacaccagttccgcatcctgcgggcggtgaagaac
cgcttcggaccggcaaacgaaatcggcgtgttcgagatgggggaaatggggctcgccgaa
gtgccgaacccatcggcgctctttctcggcgagcgcgacggggagacgagcggctcggcg
gtctttgccgggatcgaggggacgcggccggtgctggtcgaaatccaggcgctggtggcg
caaagttcgctcggcacgccgcgccgggcggttgtcggctgggacggggggcggctttcc
atgatcctcgcggtgctggaggcgcggtgcggcctctcgctggcggggcaggatgtttac
ctcaatgtggcgggcggattgcgaatcaacgagccggcggcggaccttgcggtggcggcg
gcgcttgtttcatccgtttcggggatgccgctgccgcccgattgcgtcattttcggcgaa
atcagcctttcgggcgccgtgcggcccgtgaaccagatggatgctcggctgaaagaggcg
gaaaagctgggctttacgcggggcatcattcccgccagcgcggcgcggacaaggccttcc
acggcgctgaaatttactgaaatttcggaccttgcggggcttatagcccatctcacggcg
ggggacggcaagggcaagggcgaccgccgggcacgcgatgtgtga
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