Plantactinospora sp. BC1: C6361_01205
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Entry
C6361_01205 CDS
T05377
Name
(GenBank) hypothetical protein
KO
K03090
RNA polymerase sigma-B factor
Organism
plab
Plantactinospora sp. BC1
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plab03021
]
C6361_01205
Transcription machinery [BR:
plab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C6361_01205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
STAS_2
STAS
Sigma70_r4_2
Sigma70_r3
HTH_23
GerE
Sigma70_ECF
MarR
HTH_Tnp_4
DUF7343
HTH_Crp_2
HTH_3
DUF5997
Motif
Other DBs
NCBI-ProteinID:
AVT28340
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All DBs
Position
295747..296868
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AA seq
373 aa
AA seq
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MDHNDAYRAMLDAAALRYAERAGHLSPSQRAAEAEELARLALPFVHVLARRYRERGEPVE
DLQQSGSLGLMLAIARFDPGRGSFSAYLAATVLGELKRHFRDRTWGVHVPRQLQELSQEV
RQCAATLRQRLAREPSEAELAREMGASVVDVRQARQSSLGYRPASYDAPLRGRDDSSVTL
ADQMGKPDAQLETVDERVTLQRLLAQLPPRERQILTLRFYGNKTQSEIAQRYGISQMHVS
RLLTQTLSWLRVAMLTDEPPAWRGYQPGGWPPALRLRGQLRDGVLRLRVEGEIDHDTAGQ
LRHTLLESVGRVAARRLEVDLSRVPLIDAAGVAALLAGYEASRAAGWTYRILGSPPLVAR
VLRLSGLAPLMRD
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggaccacaacgatgcgtaccgggcgatgctcgacgcggcggccctgcgctacgccgag
cgtgccggacacctgtcaccgtcgcaacgggccgccgaggccgaggaactggcccgcctg
gcgctgccgttcgtgcacgtcctcgccaggaggtaccgggagcggggcgagccggtggag
gacctgcaacagtccggcagcctcgggctgatgctggcgatcgcccggttcgacccgggc
cgcggttccttcagcgcctacctcgccgccaccgtgctgggggagctgaagcggcacttc
cgggaccgcacctggggggtgcacgtcccccgccagctacaggagctgtcccaggaggtc
cggcagtgcgcggccaccctgcggcagcggctggcccgcgagccgagcgaggcggaactg
gcccgggagatgggtgcctcggtcgtcgacgtccggcaggcccggcagtcctcgctcggg
tatcgtcccgcctcctacgacgcgcccctgcgcggccgcgacgacagcagcgtcaccctg
gccgaccagatgggcaagccggacgcccaactcgaaaccgtcgacgagcgggtcaccctg
caacggctgctggcgcagttgccgccgcgcgagcgccagattcttaccctgcgcttctac
gggaacaagacacagtcggagatcgcgcagcggtacgggatctcccagatgcacgtgtcc
cggttgttgacccagacactctcctggctgcgcgtggcgatgctcaccgacgaaccgccc
gcgtggcgcggctaccagccgggtggatggccgccggccttgcggctccgtggacagctc
cgggacggcgtcctgcggctccgggtcgagggtgagatcgaccacgacaccgccggtcaa
ctccggcacaccctgctggagtcggtcggccgggtcgccgcgcgtcggctggaggtcgac
ctcagccgggtaccgctgatcgacgccgccggggtggccgcactcctggccggatacgag
gccagccgcgccgccggttggacgtaccggatactcggctctccgccgctcgtcgcccgc
gtgctccggctctccggtctggcaccgctgatgcgggattga
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