Plantactinospora sp. BC1: C6361_02575
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Entry
C6361_02575 CDS
T05377
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
plab
Plantactinospora sp. BC1
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plab03021
]
C6361_02575
Transcription machinery [BR:
plab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C6361_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
STAS
Sigma70_r3
STAS_2
Sigma70_r4_2
HTH_23
HTH_28
Sigma70_ECF
IF2_N
MarR_2
HTH_Tnp_4
DUF7343
MarR
HTH_Crp_2
HTH_24
HTH_3
SpoIIAA-like
Motif
Other DBs
NCBI-ProteinID:
AVT28566
LinkDB
All DBs
Position
644532..645668
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AA seq
378 aa
AA seq
DB search
MFGQITTTPPAERGLEDLDAAALAYAARIAGLPPERRQEARDDLVRFALPFAGRLARRYR
GRGEPLEDLEQVARLGLVNAVDRYDPERGSFTAYAAITIVGEIKRHFRDRTWGVHVPRRL
RDLILEVGQATAALTSELSRAPSVAELAARLETPEEEILAALESAAGYSPASLNAPVGGE
SSAEFGDLVGESDTDLESVDDRVTVSGLLGRLPWRERRILAMRFYGNQTQAEIAARFGIS
QMHVSRLLSRALTWLRQAMLADSPAPWQAGGAEAGGAPARLEVRQAGERVVVEVTGEIDR
ETAEQLRQAVVEAVADGHPTEVAIDLTDVAKLDGPALAALVAGRDAAHRAGVRWRLARAQ
PVVQHSLSAAGLVALPAD
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacagatcaccaccacaccaccggccgagcgggggctggaggacctggacgcg
gccgctctggcgtacgcggcgcggatcgccggcctgccgccggaacgccggcaggaggcc
cgggacgacctcgtccggttcgccctgccgttcgccggcaggttggcccggcgctaccgg
ggccggggtgaaccactggaggacctggaacaggtggcgcggttgggcctggtgaacgcg
gtcgaccggtacgacccggaacggggctcgttcaccgcgtacgccgcgatcaccatcgtc
ggcgagatcaaacggcacttccgggaccggacctggggtgtgcacgtaccccggcggctg
cgcgacctgatcctggaggtcggccaggcgacggcggcgctgaccagcgagctgtcccgg
gcgccgagcgtggccgagttggccgcccggctggagacgccggaggaggagatcctcgcg
gcgctggagtcggcggccggctacagtccggcctcgctgaacgccccggtcggcggggag
agttcggcggagttcggcgacctcgtcggcgagtccgacaccgacctcgagtcggtcgac
gaccgggtgacggtcagcgggctgctcggccggctgccctggcgggagcggcggatcctg
gcgatgcgcttctacggcaaccagacccaggccgagatcgccgcccggttcggcatctcg
cagatgcacgtctcccggctgctctcccgggcgctcacctggctgcggcaggcgatgctc
gccgactcgccggccccgtggcaggccggcggggccgaggcgggtggcgcgccggcccgg
ctcgaggtgcgccaggcgggggagcgggtggtggtcgaggtgaccggggagatcgaccgg
gagaccgcggagcagttgcgccaggcggtggtcgaggcggtcgccgacgggcatccgacg
gaagtggcgatcgacctgaccgacgtggcgaagctggacgggccggcgctggccgccctg
gtcgccggccgggacgccgcacatcgggccggggtccggtggcggctggctcgggcgcaa
ccggtggtgcagcattcgctcagcgccgccggcctggtcgcgttgccggcggactga
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