Plantactinospora sp. BC1: C6361_14790
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Entry
C6361_14790 CDS
T05377
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plab
Plantactinospora sp. BC1
Pathway
plab03420
Nucleotide excision repair
plab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C6361_14790
03430 Mismatch repair
C6361_14790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plab03400
]
C6361_14790
Enzymes [BR:
plab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6361_14790
DNA repair and recombination proteins [BR:
plab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6361_14790
MMR (mismatch excision repair)
Other MMR factors
C6361_14790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AVT34476
LinkDB
All DBs
Position
complement(3430913..3434404)
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AA seq
1163 aa
AA seq
DB search
MTQPSLFSPAPTQRVADAGPRYTPVELAKLLRLPAPTLEQAAIISAPVEPLLVVAGAGSG
KTETMAARVVWLVANGYVEPGHVLGLTFTRKAAGELGTRIRTRLGQLVRRLGRNSRNSDD
DPFGGEPTVATYHSYAARIVTEHGLRGGYEPSTRLLTEASRWQIVDSIVRNHDGDMSEVE
RQPSTVTDAVLALAADLAEHLVTPDELAAWTGRFFAEVQSRPGRVYADVRKALHVQQLRL
RLLPLVRAYAQRKDDFEAMDFGDQLARAARVARDHPEVGAIERGRYRVVLLDEYQDTSHA
QVVLLRSLYGGGHPVTAVGDPCQSIYGWRGASAGTLDRFPTEFAQPDGTPAQVRTLTTSW
RNRPQILDVANGLAAPLRAAGAQVAELAAAFRVDEEIPGRTGRGYAGGTVHCALLDTYAD
EADWIADSILAAWRGAARMPDALPEQIPVVARPTTAVLVRLRSQIPAIEAALRDRGLPVE
VVGLGGLLDTPEVRDVVCTLRVLSDPTDGAALLRLLTGARWRIGPRDLVALHRRATAIAG
ARRELPRSDGDDDEPEIVTDRLDEATLVEALADLGPAQAYSAEGYARLRAYAKELGLLRH
RLDQPLPDLLADVERTIGLDVEVAVRAGSDGRGGDAGLARGHLDALGDVAARFAGDSAGA
PLHAFLAFLAAAEDEERGLSPGEVEVVEGAVQILTAHAAKGLEWDVVSVAGLSRGVWPGT
ARGSDHYLLGLGVLPFPLRGDADGLPELALHDADDQKAVARALATFTDDWRAHDEREERR
LAYVAVTRPRRLLLCSGYWWGEGTKRPRGPSTFLSEVYEWCLTTPEAGESGFVVDAWAPE
PAADASNPTTEVVLRAEWPADPLGARRPVLAEAAALVRRLMSEEPPEAEPTQATGDPARA
DGTDRADGAGGEDPADGAGGGELPPVDPEAAAVAAAWRREAELLLAERDMLADRSGPVEV
ALPRHLSVSQLVTLRRDPAALARALRRPMPRRPEPYARRGTAFHSWLEQRYGISRLLDVD
ELPGAADSDAAPDEALAELQERFLASEWAERTPVEVEVPFATSIGGLLVRGRMDAVFTLP
GGRYDVVDWKTGRQPTGVEAEAAAVQLAAYRLAWAELAGVPVDRVRAAFHYVRENVTVRP
ADLLDADGLAALVAQVPEAAAGG
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccctcgctgttcagcccggcgccgacccagcgggtcgccgacgccgggccg
cgctacaccccggtcgagctggccaagctgctccggctgccggcacccaccctggagcag
gccgcgatcatctcggcgccggtcgagccgctgctggtggtcgccggggccggttccggc
aagaccgagacgatggccgcccgggtggtctggctggtcgccaacgggtacgtcgaaccc
gggcacgtcctcggcctcaccttcacccggaaggcggccggagaactcggcacccggatc
cggacccggctcggtcaactcgtccgtcggctcggccgcaacagccgcaacagcgacgac
gacccgttcggcggcgagccgacggtggcgacgtaccactcgtacgcggcccggatcgtc
accgagcacggcctgcgtggcgggtacgagccgtcgacccggctgctcaccgaggcgtcc
cgctggcagatcgtcgactcgatcgtccgcaaccacgacggcgacatgtccgaggtggag
cggcagccgagcaccgtcaccgacgccgtactggcgctcgccgcagacctggccgagcac
ctggtcaccccggacgagctggccgcctggacgggacggttcttcgccgaggtgcagtcc
cggcccggccgggtctacgccgacgtacgcaaggcgctgcacgtccagcagctccggctg
cggctgctgccgctggtccgggcgtacgcccagcgcaaggacgacttcgaggcgatggac
ttcggcgaccagcttgcccgggcggcgcgggtggcccgggaccacccggaggtgggcgcg
atcgagcgcgggcgctaccgggtggtgctgctcgacgaataccaggacaccagtcacgcc
caggtggtgctgctccgttcgctctacggcggcgggcacccggtcaccgccgtcggcgac
ccgtgccagtcgatctacggctggcggggtgccagcgccggcaccctggaccggttcccg
accgagttcgcccagccggacggcacgccggcccaggtgcgcaccctcaccacgagctgg
cggaaccggccgcagatcctggacgtcgccaacgggctcgccgcgccgctgcgggccgcc
ggggcgcaggtcgccgagctggccgccgcgttccgggtcgacgaggagatccccggccgc
accggccgggggtacgccggcggcacggtgcactgcgcgctgctcgacacgtacgccgac
gaggccgactggatcgccgacagcatcctcgccgcctggcggggcgcggcccggatgccg
gacgcgctgccggagcagattccggtggtggcccggccgacgacggcggtgctggtccgg
ctgcgcagccagatcccggcgatcgaggcggcgctgcgggaccggggactgccggtcgag
gtggtcggcctcggcgggctgctggacacccccgaggtgcgggacgtggtctgcaccctg
cgggtgctctccgacccgaccgacggtgccgcgctgctccggctgctgaccggagcccgc
tggcggatcggcccgcgtgacctggtcgccctgcaccgccgggccaccgcgatcgccggg
gcccgccgggaactgccccgctccgacggcgacgacgacgagccggagatcgtcaccgac
cgcctcgacgaggcgaccctggtcgaggcgctggccgacctcgggccggcgcaggcgtac
tcggcggagggttacgcccggctgcgggcgtacgccaaggaactcggcctgctccggcac
cgcctggaccagccgctgccggacctgctcgcggacgtcgaacggaccatcggcctcgac
gtcgaggtggcggtccgcgccggcagcgacggccggggcggcgacgccggactggcccgg
gggcacctggacgcgctcggcgacgtggcggcccggttcgccggtgactcggccggtgcg
ccgctgcacgccttcctggccttcctcgccgccgccgaggacgaggagcggggactctcc
ccgggcgaggtcgaggtggtggagggtgcggtgcagatcctcaccgcgcacgccgccaag
ggcctggagtgggatgtggtctcggtggccgggctgagccggggcgtctggccgggtacg
gcccggggctccgaccactatctgctcggcctcggggtgctgccgttcccgctgcgcggc
gacgcggacgggctgcccgagctggcgctgcacgacgccgacgaccagaaggcggtggcc
cgggcgctggccaccttcaccgacgactggcgggcgcacgacgagcgggaggaacgccgg
ctggcgtacgtcgcggtcacccggccgcgccggctgctgctctgctccggctactggtgg
ggcgaggggacgaaacggccacgcggcccgtcgaccttcctctccgaggtgtacgagtgg
tgcctgaccacgcccgaggccggcgagagcggcttcgtggtcgacgcctgggcgccggag
ccggcggccgacgccagcaacccgaccaccgaggtggtgctccgggccgagtggccggcc
gacccgctcggtgcccgtcggccggtactcgccgaggccgccgccctggtccgccgcctg
atgtcggaagaaccacccgaggcggagccgacccaggcgaccggcgaccccgcacgggcg
gacggcaccgaccgggcggacggcgccggtggtgaggacccggcggacggcgccggtggt
ggggagttgccgccggtcgacccggaggcggcggccgtcgcggcggcctggcggcgcgag
gccgaactgctgctcgccgagcgggacatgctggcggaccgctccggaccggtcgaggtg
gcgctcccccgtcacctgtcggtctcgcagctcgtgacgctgcgccgggacccggcggcg
ctggcccgcgcgttgcgccggccgatgccccggcgccccgagccgtacgcccggcgcggc
accgcgttccactcctggctggagcagcggtacgggatcagccggctgctcgacgtcgac
gagctgcccggggcggccgactcggacgccgccccggacgaggcgctggccgagttgcag
gagcgcttcctggccagcgagtgggccgagcgcactccggtggaggtggaggtgccgttc
gccacgtcgatcggcgggctgctggtccggggccggatggacgccgtcttcaccctcccc
ggcggccggtacgacgtcgtcgactggaagacggggcggcagccgaccggggtcgaggcg
gaggccgccgcggtgcagttggcggcgtaccggctggcctgggcggaactggcgggtgtg
ccggtcgaccgggtccgggcggccttccactacgtacgggagaacgtgaccgtacgtccg
gcggacctgctcgacgccgacggcctggccgcgctggtggcgcaggtgccggaggcggcg
gcgggcggttga
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