Plantactinospora sp. BC1: C6361_15060
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Entry
C6361_15060 CDS
T05377
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
plab
Plantactinospora sp. BC1
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plab03016
]
C6361_15060
Enzymes [BR:
plab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C6361_15060
Transfer RNA biogenesis [BR:
plab03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C6361_15060
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AVT30582
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All DBs
Position
3496479..3497801
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AA seq
440 aa
AA seq
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MTDEPPLRRRAAQRRAGDEPHSLPASAPDPETVGPDPTPGGPVPLLTPRDGTPAPVETAD
GLADVVSRFAAGTGPVAVDAERASGYRYSQRAYLVQLRRAGAGTALIDPLPLGDLRTLDE
AIADAEWVLHAASQDLACLADLGLRPRRLFDTELAARLAGFERVGLAALTEQLLGFTLEK
HHSAADWSSRPLPESWLTYAALDVEMLTELRDKLAAELERQGKAQWAAEEFAALVAWGAQ
PARQRPDPWRRTSGIHRVRGARAQARVRSLWYARDEIAARRDSAPGRVLPDAAIIAAAEM
DPKDERTLLMLPGFGGRSVRRLVRTWLDALADARQLPDDALPVSPTVDGPPPPHRWAERD
PVAAARLARCREVVTRIAAAHTLPPENLITPDSVRRLAWIPPEEITADTVAETLRGYGAR
GWQVGLIAEELAAALVEPKT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgaaccacccctgcgccgtcgggccgcgcaacgccgagcaggggacgagccg
cacagccttccggcgtccgcgccggatcccgagacagtggggcccgacccaacgcccggc
gggcccgtaccgcttctcacccctcgcgacggcaccccggccccggtcgagacagccgac
ggcctggccgacgtggtgtcccgattcgcggccggcaccggcccggtcgccgtcgacgcc
gagcgcgcctccggctaccgctacagccaacgcgcctacctcgtccagctccggcgggcg
ggggccggcaccgcgctgatcgatccactgcccctcggcgacctgcgcaccctcgacgag
gcgatcgcggacgccgagtgggtgctgcacgcggccagccaggatctcgcctgcctcgcc
gacctcgggctgcggccgagacgcctcttcgacaccgagctggccgcccggctcgccggc
ttcgaacgggtcggcctggccgcgctgaccgagcaactgctcggcttcaccctggagaag
caccactcggcggccgactggtccagccggccgctgccggagtcctggctcacctacgcc
gcgctggacgtggagatgctcaccgagctgcgggacaagctcgcggccgagctggagcgg
cagggcaaggcgcagtgggcggccgaggagttcgccgcgctggtggcctggggcgcccag
ccggcccggcagcgacctgacccgtggcggcggacctccggcatccaccgggtgcggggg
gcgcgggcgcaggcccgggtgcggtcgctctggtacgcccgggacgagatcgccgcccgc
cgcgactcggcgcccggccgggtgctgccggatgccgcgatcatcgcggccgccgagatg
gacccgaaggacgagcggaccctgctgatgctgcccggcttcggcggccgctcggtacgc
cggctcgtccggacctggctggacgcgctcgccgacgcccggcaactgcccgacgacgcg
ctgccggtgagcccgacggtcgacgggccgcccccgccgcatcgctgggccgaacgggac
ccggtggcggcggcccggttggcccgctgccgtgaggtggtgacccggatcgccgcggcg
cacaccctgccgccggagaacctgatcaccccggactcggtacgccggctggcctggatc
ccgccggaggagatcaccgccgacacggtcgccgagacgctgcgcggttacggcgcccgg
ggctggcaggtcggcctgatcgccgaggagctggcggcggcgctggtcgagccgaagacc
tga
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