Plantactinospora sp. BC1: C6361_15700
Help
Entry
C6361_15700 CDS
T05377
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
plab
Plantactinospora sp. BC1
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plab03009
]
C6361_15700 (rimO)
Enzymes [BR:
plab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C6361_15700 (rimO)
Ribosome biogenesis [BR:
plab03009
]
Prokaryotic type
ribosomal protein modification factors
C6361_15700 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TraT
Motif
Other DBs
NCBI-ProteinID:
AVT30678
LinkDB
All DBs
Position
complement(3639657..3641171)
Genome browser
AA seq
504 aa
AA seq
DB search
MVSAASSSSSTAGRRVALLTLGCARNEVDSEELAARLHADGWQVTTDGEGADVVLVNTCG
FVEKAKQDSIQTLLAAADTGAKVVAAGCMAERYGRELADGMPEAGAVLSFDDYPDISARL
DEVLAGKQLPAHTPRDRRELLPLTPVARHGGAVSLPGHGETGTRPAGGTLVADAHTPAHL
RPVLRHRLDSGPVASLKLASGCDRRCAFCAIPTFRGAFVSRTPDELLAEAEWLARSGVRE
LVLVSENSTSYGKDLGDPRLLEKLLPQLAAVDGIVRVRASYLQPAETRPGLVEVIATTPG
VAPYFDLSFQHSSEAVLRRMRRFGSTDRFLELLASVRRFAPEAGARSNVIVGFPGETRAD
VAELERFLTAARLDAIGVFDYSDEDGTEAAGLSGKVSPATVKRRYDRLSALADELCSQRA
EERLGAVVEVLVDSVDDGVVEGRAAHQAPEVDGSTTLVAPVGGGVDLAALRPGDLVRARV
TGTEGVDLMAVPEEMVSAAPRGAG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgccgcttcctcttcctcctcgaccgccggccgccgggtcgcgctgctcacc
ctcggctgtgcccgtaacgaggtcgactcggaggagttggccgcccggctgcacgccgac
ggctggcaggtgaccaccgacggcgagggcgccgacgtggtgctggtcaacacctgcggc
ttcgtggagaaggccaagcaggactcgatccagacgctgctggccgccgccgacaccggg
gccaaggtcgtggcggcgggctgcatggccgagcgctacggtcgggagctggccgacggc
atgcccgaggccggtgcggtgctcagcttcgacgactatcccgacatctcggcccgactc
gacgaggtgctggccggcaagcagttgcccgcgcacaccccccgggaccgacgggagctg
ctgccgctgaccccggtcgcccggcacggcggcgcggtctcgctgcccggacacggcgag
accggcacccgcccggccggcggcaccctggtggccgacgcgcacactcccgcgcacctg
cgcccggtgctgcggcaccggctcgactccggcccggtcgcctcgctgaagctggccagc
ggctgcgaccggcgctgtgcgttctgcgccatcccgaccttccggggcgccttcgtctcg
cgtaccccggacgagctgctcgccgaggcggagtggctggcccgttcgggcgtccgggag
ctggtgctggtcagcgagaactccacctcgtacggcaaggatctcggcgacccccggctg
ctggagaagctgctgccgcagctcgccgcggtggacggcatcgtccgggtccgggccagc
tacctccagccggccgagacccgccccgggctggtcgaggtgatcgccaccacgccgggg
gtggcaccctacttcgacctctcgttccagcactccagcgaggcggtgttgcgccggatg
cgccggttcggctcgaccgaccggttcctcgaactgctcgcgtcggtgcgccggttcgcc
cccgaggccggtgcccggagcaacgtgatcgtcggcttccccggcgagacccgggcggac
gtggcggagctggagcgcttcctcaccgccgcccggctggacgcgatcggcgtcttcgac
tacagcgacgaggacggcaccgaggccgccggcctgtccggcaaggtctcgccggccacg
gtgaagcggcggtacgaccggctctccgcgctcgccgacgaactctgctcacagcgtgcg
gaggagcggctcggcgcggtcgtcgaggtgctggtcgactcggtggacgacggcgtggtg
gagggccgggcggcccaccaggcgccggaggtggacggctcgaccaccctggtcgccccg
gtcggcggcggggtcgacctggccgcgttacgccccggtgacctggtccgggccagggtc
accgggaccgagggcgtggacctgatggccgtaccggaggagatggtctcggcggcgccg
cgtggggcggggtga
DBGET
integrated database retrieval system
