Plantactinospora sp. BC1: C6361_15865
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Entry
C6361_15865 CDS
T05377
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plab
Plantactinospora sp. BC1
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plab03016
]
C6361_15865
Enzymes [BR:
plab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C6361_15865
Transfer RNA biogenesis [BR:
plab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C6361_15865
Prokaryotic type
C6361_15865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AVT30706
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All DBs
Position
complement(3678377..3679270)
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AA seq
297 aa
AA seq
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MSSDGLIVVDKPADMTSHDVVARIRRLARTRRVGHGGTLDPMATGVLIIGVGRATRLLTY
VIGAGKGYTATIRLGQSTVTDDAEGEVVATADAAGVTEEAVRAAVLPLTGEIDQVPSAVS
AIKIDGQRAYKRVRDGEAVELAARRVTVSRFDVLGLRRDTVDGVAVLDVDVAVDCSSGTY
IRALARDLGAALGVGGHLTALRRTAVGGFTLAEATTLPELEQRAPDVVGLTVEAAARRFF
PQRQASADEAKVLSHGGPLDPGGITGPYAVFDPAGGLIAIVSDRDGRARAEIVLAPA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagtgacggtctgatcgtggtcgacaagcccgccgacatgacatcgcacgacgtg
gtggcccggatccgccggctggcccggacccgccgggtcgggcacggcggcaccctggac
ccgatggccaccggagtgctgatcatcggggtcggtcgggccacccggctgctgacgtac
gtgatcggggccggcaagggttacaccgcgacgatccggctcggccagtcgacggtgacc
gacgacgccgagggcgaggtggtcgccaccgccgacgccgccggggtcaccgaggaggcg
gtacgcgccgctgtgctgccgctgaccggcgagatcgaccaggtgccgagcgcggtcagc
gcgatcaagatcgatggacagcgggcctacaagcgggtacgcgacggcgaggcggtcgag
ttggccgcgcggcgggtcaccgtctcccgcttcgacgtgctcggccttcgtcgcgacacg
gtcgacggggtggccgtgctggacgtggacgtggcggtggactgctcgtccgggacgtac
atccgggcactcgcccgggacctcggcgccgcgctcggggtcggcgggcacctgaccgcg
ctgcggcgtaccgccgtgggcggcttcacgctggccgaggcgacgaccctgccggagctg
gaacaacgcgccccggacgtggtcgggctgaccgtcgaggcggcggcccggcggttcttc
ccgcagcgccaggccagcgcggacgaggcgaaggtgctctcgcacggcggtccactcgac
ccgggcggcatcaccgggccgtacgcggtcttcgatccggcgggtggcctgatcgctatc
gtcagcgaccgggacggtcgggcccgggcggagatcgtgctcgccccggcctga
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