Plantactinospora sp. BC1: C6361_17605
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Entry
C6361_17605 CDS
T05377
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
plab
Plantactinospora sp. BC1
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plab03032
]
C6361_17605
03400 DNA repair and recombination proteins [BR:
plab03400
]
C6361_17605
Enzymes [BR:
plab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C6361_17605
DNA replication proteins [BR:
plab03032
]
Prokaryotic type
DNA Topoisomerases
C6361_17605
DNA repair and recombination proteins [BR:
plab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C6361_17605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
TPD52
Motif
Other DBs
NCBI-ProteinID:
AVT30992
LinkDB
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Position
complement(4050243..4053809)
Genome browser
AA seq
1188 aa
AA seq
DB search
MTDTPESSANEPEQEAAASAVAQHDRIEPVGLEVEMQRSYLDYAMSVIVGRALPDVRDGL
KPVHRKILYAMFDSGYRPDRGYVKCSRVVGDVMGQFHPHGDSAIYDALVRMAQTWSLRYP
LVDGNGNFGSPGNDPAAAMRYCLTGDARIRTADGTVRIDQVVPGAVPSSETEIDLKVRDR
NGDLVRASKFFHSGEHPTLRLRTREGYELTGTHNHPVLCLVQVAGVPTLLWKLLAEVRPG
DRVVLQRTVPDEIGYPTLEHVEAAVLGARSAAKFVPEFVWQGPAAVKRAFLQALFEGDGS
SSLLPRNTIQISYSTRSERLAREVQQLLLEFGVVSRQCRYDNGEIKVVVTNRRDARLFAQ
HVGFLGRKQAKLESELAGVPANSTALSSDHVPYVGEFIREHGAQGRTERDWLRRHNVDRI
ERWEQDRGEILARVTEREVRDVVEPLVDGRFYYAEVAEVADAGVRPVYSLRVETEDHSFV
SDGFVSHNTECKLDPLAMEMLRDIDEDTVDFQDNYDGRAKEPTILPSRIPNLLVNGSEGI
AVGMATKIPPHNLREIAAAVQWCLENPEADEATTLDELIGIVKGPDFPTHGLIVGTTPIQ
DAYRTGRGSIRMRAVVEVEEDKKGRTSLVVTELPYQVNPDNLAERIAELIKEGKLAGIAD
IRDESSGRTGMRIVLVLKRDAVAKVVLNNLYKHTQLQETFGANMLALVDGVPRTLNLAQF
IRHYVDHQIDVIRRRTAYRLRKAEERAHILRGLVKALDALDEVIALIRRSPTVEEARQGL
IQLLDIDEVQATAILDMQLRRLAALERQKIIDELAKIELEIADLKDILAKPERQRKIVSE
ELGEIVAKWGDERRTKIVPFEGEVSMEDLIAREDVVVTITRTGYAKRTKVDLYRSQRRGG
KGVSGATLRQDDIVSNFFVCSTHDWMLFFTNKGRVYRAKAYELPEASRVARGQHVANLLA
FQPDEQIAQVIEIPDYQVAPYLVLATRNGLVKKTRLEEFDSNRSGGIIAINLRDEDELVG
AALAGPGDDLLLVSKKAQAIRFNATDEALRPMGRATSGVIGMRFTDDDVLLAMEVVREGM
DLDVLVATNGGYAKRTPIEEYPVQGRGGKGVLTAKITERRGGLVGAVVISPDDELFAITS
NGGVIRTPVKPVRRTRDRNTMGVKLMDLPDGVTIVAIARNADEPDEQD
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
gtgacggatactcccgagtcctccgctaacgagccggagcaggaagcggccgcgagcgcg
gtggcccagcacgaccggatcgaaccggtcgggctcgaggtggagatgcagcgctcctac
ctcgactacgcgatgagcgtgatcgtcggacgggcgctgccggacgtacgggacgggctc
aagcccgtacaccggaagatcctctacgcgatgttcgactccggctaccgccccgaccgg
gggtacgtgaagtgctcccgggtggtcggcgacgtgatgggtcagttccacccgcacggc
gactcggcgatctacgacgcgctggtccggatggcccagacctggtcgctgcgctacccg
ctggtcgacggcaacggcaacttcggttcgccgggcaacgatccggccgccgcgatgcgc
tactgcctcaccggcgatgcccggattcgtaccgctgacggcaccgtacggatcgaccag
gtcgtccccggcgcggtgcccagctccgagacggagatcgacctcaaggtccgggaccgc
aacggcgacctggtccgggcctcgaagttcttccactccggcgagcacccgacgctgcgg
ctgcgcacccgcgagggctacgagctgaccggtacgcacaaccacccggtgctctgcctg
gtgcaggtggccggcgtgccgaccctgctctggaagctgctcgccgaggtccgccccggt
gaccgggtggtgctccagcggacggtgccggacgagatcggctacccgacgctggaacac
gtggaggcggcggttctcggggcgcggagtgcggcgaagttcgtgccggagttcgtctgg
caggggccggcagcggtcaagcgcgccttcctccaggcgctcttcgagggcgacggctcg
tcgtcgctgctgccccgcaacaccatccagatctcgtactcgacccgtagcgagcggctg
gcccgtgaggtccagcagttgctgctggagttcggcgtggtcagccggcagtgccggtac
gacaacggcgagatcaaggtcgtggtgaccaaccggcgagacgcccggctcttcgcgcag
cacgtcggcttcctcggccgcaagcaggcgaagctggagtccgagttggccggcgtgccg
gccaacagcacggcgctgtcgagcgaccacgtgccgtacgtcggcgagttcatccgcgag
cacggtgcgcagggccggaccgagcgggactggctgcgccggcacaacgtcgaccggatc
gagcgctgggagcaggaccggggcgaaattctggcccgggtcaccgagcgggaggtgcgc
gacgtcgtcgagccgctggtggacggccggttctattacgcggaggtcgccgaggtcgcc
gacgcgggtgtgcggccggtctacagcctgcgggtcgagaccgaggaccactccttcgtc
agcgacggtttcgtcagccacaacaccgagtgcaagctcgacccgctggcgatggagatg
ctccgggacatcgacgaggacaccgtcgacttccaggacaactacgacggccgggccaag
gaaccgacgatcctgccgtcccggatccccaacctgctggtgaacggctccgagggcatc
gcggtcggcatggccaccaagatcccgccgcacaacctacgggagatcgccgccgcggtg
cagtggtgcctggagaacccggaggccgacgaggcgacgacgctcgacgagctgatcggg
atcgtcaagggaccggacttcccgacccacgggctgatcgtcgggaccaccccgatccag
gacgcgtaccggaccggacggggctcgatccggatgcgcgcggtggtcgaggtcgaggag
gacaagaagggccggacgagcctggtcgtcaccgagctgccgtaccaggtcaaccccgac
aacctggccgagcggatcgccgagctgatcaaggaggggaagctcgccgggatcgccgac
atccgggacgagtcctccgggcgtaccggtatgcggatcgtgctggtgctcaagcgcgac
gcggtcgccaaggtggtgctgaacaacctctacaagcacacccagctccaggagaccttc
ggcgccaacatgctggccctggtcgacggggtgccgcgcacgctcaacctggcccagttc
atccggcactacgtggaccaccagatcgacgtgatccggcggcggacggcgtaccggttg
cgcaaggccgaggaacgggcgcacatcctgcggggtctggtcaaggcgctggacgcgctc
gacgaggtcatcgcgctgatccggcgctcgcccacggtggaggaggcccggcagggcctg
atccagctgctggacatcgacgaggtgcaggccaccgcgatcctggacatgcagctccgc
cggctcgccgcgctggagcgtcagaagatcatcgacgagctggccaagatcgagctggag
atcgccgacctcaaggacatcctggccaagccggagcggcagcggaagatcgtctccgag
gaactcggcgagatcgtggccaagtggggcgacgagcggcggaccaagatcgtgcccttc
gagggcgaggtctcgatggaggacctgatcgcccgcgaggacgtggtcgtcaccatcacc
cggaccggatacgccaagcggaccaaggtcgacctctaccgttcgcagcgccggggcggc
aagggggtcagtggcgcgacgctgcgtcaggacgatatcgtcagcaacttcttcgtctgc
tccacgcacgactggatgctcttcttcaccaataaggggagggtgtaccgggccaaggcg
tacgagttgccggaggccagtagggtggcgagaggccagcacgtggccaatctgctcgcc
ttccagcctgacgagcagatcgcccaggtgatcgagattccggactaccaggtcgcgccg
tacctggtactggccaccaggaacggtctggtgaagaagacgaggttggaggagttcgat
tccaaccgctccggcggcatcatcgcgatcaacctccgcgacgaggacgagctggtcgga
gcggcgctggcggggcccggggacgacctcctgctggtctccaagaaggcgcaggcgatc
cggttcaacgccaccgacgaggcgctccggccgatgggtcgggccacctcgggcgtgatc
gggatgcggttcaccgacgacgacgtgctgttggcgatggaggtggtccgcgagggcatg
gacctggatgtcctcgtggcgacgaacgggggttacgcgaaacgtaccccgatcgaggaa
taccccgtgcagggtaggggaggtaaaggggtgctgaccgcgaagatcacagagcgccgt
ggcggtctggtgggcgcggtcgtcatcagcccggacgacgagctgttcgccatcaccagc
aacggcggtgtgatccggactccagtgaagcctgtacgccgaacgcgtgaccggaacaca
atgggggtcaaactcatggacctaccagacggcgtgactattgtggcgattgctcgcaat
gccgacgagcctgacgaacaggactag
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