Plantactinospora sp. BC1: C6361_18735
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Entry
C6361_18735 CDS
T05377
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
plab
Plantactinospora sp. BC1
Pathway
plab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6361_18735 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plab03019
]
C6361_18735 (recQ)
03400 DNA repair and recombination proteins [BR:
plab03400
]
C6361_18735 (recQ)
Enzymes [BR:
plab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6361_18735 (recQ)
Messenger RNA biogenesis [BR:
plab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C6361_18735 (recQ)
DNA repair and recombination proteins [BR:
plab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C6361_18735 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Tuberculin
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AVT31177
LinkDB
All DBs
Position
complement(4302261..4304120)
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AA seq
619 aa
AA seq
DB search
MALPTDQHTDETEQRTGDALDVLRRVFGYDSFRGEQREIIDQVVRGGDALVLMPTGGGKS
LCYQIPALVRDGVGVVISPLIALMQDQVDALTTLGVRAGFLNSTQDFETRRLVEAAFLAG
EVDLLYLAPEALRSEHVLRLLDRGNIALFAIDEAHCVAQWGHDFRPDYLALSMLHERWPA
VPRIALTATATPDTHAEIAARLNLKDARHFVASFDRPNIQYRIVPKREPKKQLLDLLRTE
HPGDAGIVYCLSRASVEKTAEFLVQNGIPALPYHAGLDAPTRAANQQRFLREDGLVMVAT
IAFGMGIDKPDVRFVAHLDLPKSIEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKLIE
GSDGDLARRRVLGTHLDAMLALCETVECRRIRLLEYFGQQSGPCGNCDTCLSPPESWDGT
VAAQKLLSTVLRLHRERDQRFGAGQSIDILLGRQTEKVIQHRHDTLSVFGIGTELTESEW
RGVVRQLLAQGLLAVEGDYGTLVLTESSGDVLGKRREVRMRREAPRAASSGRAGKPRAAG
AAAVALPPTAEPVFERLRAWRAATAKEQGVPAYVIFHDATLRQIAAEPPTTLAELARVNG
VGENKLAKYGQQILDTLAE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccctccccaccgaccagcacaccgacgagaccgagcaacggaccggcgacgccctc
gacgtgctgcgccgggtcttcggctacgacagcttccgtggcgagcagcgcgagatcatc
gaccaggtcgtgcgcggcggcgacgcgctggtgctgatgccgaccggcggcggcaagtcg
ctctgctaccagatccccgcgctcgtccgggacggggtcggagtggtgatctcgccgctc
atcgcgctgatgcaggaccaggtcgacgcgctgaccaccctcggggtacgcgccggcttc
ctcaactccacccaggatttcgagacccggcggctggtcgaggcggccttcctggcgggc
gaggtcgacctgctctacctcgcccccgaggcgctccgctccgaacacgtgctccggctg
ctcgaccgaggcaacatcgcgctcttcgcgatcgacgaggcgcactgcgtcgcccagtgg
ggccacgacttccgccccgactacctggccctgtcgatgctgcacgagcggtggccggcg
gtgcccaggatcgcgctgaccgccaccgccaccccggacacccacgccgagatcgcggcc
cggctcaacctcaaggacgcccggcacttcgtcgccagcttcgaccggccgaacatccag
tatcggatcgtgccgaagcgggagccgaagaagcagctcctcgacctgctccgcaccgag
catcccggcgacgccggcatcgtctactgcctctcccgggcctcggtggagaagaccgcc
gagttcctggtccagaacggcatcccggcactgccgtaccacgccgggctcgacgcgccg
acccgggccgccaaccagcagcggttcctccgcgaggacgggctggtgatggtcgcgacg
atcgccttcgggatggggatcgacaagccggacgtacgcttcgtcgcccatctggacctg
ccgaaatcgatcgagggctactaccaggagaccggtcgggccggccgggacgggctcccc
tcgaccgcctggctggcgtacgggctccaggacgtggtgcagcagcgcaagctgatcgag
ggttccgacggcgacctggcccggcgccgggtgctcggcacacacctcgacgcgatgctg
gcgctctgcgagacggtcgagtgccggcggatccgactcctcgaatacttcggtcagcag
agcgggccgtgcggcaactgcgacacctgcctgtccccgcccgagtcctgggacggcacc
gtcgcggcgcagaaactcctctccaccgtgctgcggctgcaccgcgagcgcgaccagcgg
ttcggcgccggccagtccatcgacatcctgctcggccggcagaccgagaaggtcatccag
caccggcacgacacgctcagcgtcttcggcatcggcaccgagctgaccgagtccgagtgg
cgcggggtggtccggcaactcctcgcccagggactgctggcggtcgagggcgactacggc
acgctggtgctcaccgagagcagcggggacgtcctcggcaagcggcgcgaggtgcggatg
cgccgggaggcaccccgggccgcgtcgagcggccgggccgggaagccccgggccgccggt
gccgccgccgtcgcgctgccgccgaccgccgagccggtcttcgaacggctccgggcctgg
cgggcggcgaccgccaaggagcagggcgtaccggcgtacgtcatcttccacgacgcgacc
ctgcggcagatcgcggccgagccgccgacgaccctggccgagctggcccgggtcaacggt
gtcggggagaacaagctcgcgaagtacgggcagcagatcctggacaccctcgcggagtga
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